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https://rctn.org/w/index.php?title=VS212B&diff=7202
VS212B
2013-12-10T05:52:41Z
<p>Masilver: /* Week 6 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 4 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 6 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 11 - (Veteran's Day Holiday)'''<br />
* '''Nov. 13 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 18 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
**** [http://redwood.berkeley.edu/VS212B/lopes_da_silva_2013.pdf Lopes da Silva (2013) "EEG and MEG: Relevance to neuroscience" Neuron 80:1111-1128]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/SubML_BrainInflation.mp4 cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 6 (Silver) ====<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/kirkby_et_al_2013.pdf Kirkby, Sack, Firl, and Feller (2013) "A role for correlated spontaneous activity in the assembly of neural circuits" Neuron 80:1129-1144]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7201
VS212B
2013-12-10T05:50:46Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 4 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 6 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 11 - (Veteran's Day Holiday)'''<br />
* '''Nov. 13 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 18 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
**** [http://redwood.berkeley.edu/VS212B/lopes_da_silva_2013.pdf Lopes da Silva (2013) "EEG and MEG: Relevance to neuroscience" Neuron 80:1111-1128]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/SubML_BrainInflation.mp4 cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 6 (Silver) ====<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7200
VS212B
2013-12-10T05:50:01Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 4 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 6 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 11 - (Veteran's Day Holiday)'''<br />
* '''Nov. 13 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 18 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
**** [http://redwood.berkeley.edu/VS212B/lopes_da_silver_2013.pdf Lopes da Silver (2013) "EEG and MEG: Relevance to Neuroscience" Neuron 80:1111-1128]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/SubML_BrainInflation.mp4 cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 6 (Silver) ====<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7173
VS212B
2013-11-24T07:11:29Z
<p>Masilver: /* Week 6 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 4 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 6 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 11 - (Veteran's Day Holiday)'''<br />
* '''Nov. 13 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 18 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/SubML_BrainInflation.mp4 cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 6 (Silver) ====<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7161
VS212B
2013-11-06T01:36:18Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_4_slides_2013.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7160
VS212B
2013-11-06T01:35:21Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2013.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7159
VS212B
2013-11-06T01:34:58Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [Xhttp://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7158
VS212B
2013-11-06T01:32:06Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7157
VS212B
2013-11-06T01:31:30Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7156
VS212B
2013-11-06T01:30:43Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 11 (4 - 6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7155
VS212B
2013-11-06T01:30:09Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6PM) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Dec. 4 (4 - 6PM) - Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7154
VS212B
2013-11-06T01:28:48Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 25 (4 - 6:30) - Extrastriate cortex'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 2 (4 - 6PM) - Visual attention'''<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7153
VS212B
2013-11-06T01:26:40Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72; Chapter 8, pp. 129-140 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1218-1221; Chapter 56, pp. 1259-1274<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7152
VS212B
2013-11-06T01:23:51Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Kandel et al., Chapter 28, pp. 621-628<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 8, p. 240<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 7, pp. 187-218<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7151
VS212B
2013-11-06T01:15:47Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 85-91; Chapter 7, pp. 204-206<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=7150
VS212B
2013-11-06T01:11:36Z
<p>Masilver: /* Reading and other resources */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, et al. (2013, 5th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2012, 3rd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6578
VS212B
2012-11-24T07:06:19Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6577
VS212B
2012-11-24T06:58:26Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6576
VS212B
2012-11-24T06:55:53Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6575
VS212B
2012-11-24T06:49:41Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides_2012.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6574
VS212B
2012-11-24T06:49:12Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6573
VS212B
2012-11-24T05:34:57Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
** Visual cortical development and plasticity<br />
*** Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6572
VS212B
2012-11-24T05:33:51Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
** Visual cortical development and plasticity<br />
***Supplemental readings (optional):<br />
**** Fahle and Poggio, Introduction, pp. ix-xix<br />
**** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
**** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
**** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
**** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
*** Video from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6571
VS212B
2012-11-24T05:32:43Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6564
VS212B
2012-11-21T23:45:30Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
** Experimental methods in visual neuroscience<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_3_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
**** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
**** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
**** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
**** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
**** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
**** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6563
VS212B
2012-11-21T23:44:07Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
** Visual attention<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
**** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
**** Wolfe et al., Chapter 8, pp. 189-209<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
**** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
**** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6562
VS212B
2012-11-21T23:42:38Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** Extrastriate cortex<br />
<!--<br />
*** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
--><br />
*** Supplemental readings (optional):<br />
**** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
**** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
**** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
**** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
**** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
*** Videos from lecture:<br />
**** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
**** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
**** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
**** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
**** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6561
VS212B
2012-11-21T23:39:32Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_1_slides.pdf Lecture slides]<br />
--><br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/lecture_2_slides.pdf Lecture slides]<br />
--><br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6560
VS212B
2012-11-21T23:38:04Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 20 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
** [http://redwood.berkeley.edu/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
--><br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6547
VS212B
2012-11-17T02:24:12Z
<p>Masilver: /* Syllabus */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
--><br />
* '''Nov. 21 - Redundancy reduction; LGN; visual cortex'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
--><br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
--><br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
--><br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6546
VS212B
2012-11-17T02:22:37Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
--><br />
* '''Nov. 21 - Redundancy reduction; LGN; visual cortex'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
--><br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
--><br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
--><br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
* '''Dec. 5 (4-6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6545
VS212B
2012-11-17T02:21:28Z
<p>Masilver: /* Syllabus */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
--><br />
* '''Nov. 21 - Redundancy reduction; LGN; visual cortex'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
--><br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4 - 6:30PM) - Extrastriate cortex / Visual attention'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
--><br />
* '''Nov. 28 (4 - 6:30PM) - Visual attention / Experimental methods in visual neuroscience'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
--><br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4 - 6:30PM) - Experimental methods in visual neuroscience / Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
* '''Dec. 5 (4-6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6544
VS212B
2012-11-17T02:19:47Z
<p>Masilver: /* Syllabus */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/book WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 5 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Olshausen, [http://redwood.berkeley.edu/bruno/papers/CNS2010-chapter.pdf 20 years of learning about vision: Questions answered, questions unanswered, and questions not yet asked.]<br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapter 3<br />
<br />
* '''Nov. 7 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
** Reading: <br />
*** Rodieck: Chapter 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 14 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Rodieck, Chapter3<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 19 - Sampling; receptive fields; optic nerve'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/VS212B/induced-fading-movie.mov movie]<br />
--><br />
* '''Nov. 21 - Redundancy reduction; LGN; visual cortex'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
--><br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 26 (4-6:30PM) - Extrastriate cortex / visual attention'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/VS212B/misbinding.mov Misbinding of color and motion]<br />
--><br />
* '''Nov. 28 (4-6PM) - Visual attention'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/VS212B/Tourists.mov sphinx change blindness demo]<br />
--><br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 3 (4-6PM) - Experimental methods in visual neuroscience'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/VS212B/arash_fazl.gif cortical magnification]<br />
--><br />
* '''Dec. 5 (4-6PM) - Visual cortical development and plasticity'''<br />
<!--<br />
** [http://redwood.berkeley.edu/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
--></div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6099
VS212B
2011-11-14T19:44:19Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205-217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6098
VS212B
2011-11-14T18:58:15Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 13, pp. 205- 217; Chapter 14, pp. 219-234; Chapter 19, pp. 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6097
VS212B
2011-11-14T18:56:15Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapters 13, 14, and 19, pp. 205-234, 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Gazzaniga, Chapter 1, pp. 7-28; Chapter 4, pp. 67-72 <br />
*** Kandel, Schwartz, and Jessell, Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6096
VS212B
2011-11-14T18:51:11Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; photoreceptor renewal; dynamic range'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapters 13, 14, and 19, pp. 205-234, 281-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6070
VS212B
2011-11-04T18:41:48Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapters 13, 14, 18, and 19, pp. 205-234, 269-288<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6069
VS212B
2011-11-04T03:04:23Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov28_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2011_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6068
VS212B
2011-11-04T03:03:46Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov21_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec6_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec8_2010_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6067
VS212B
2011-11-04T03:03:18Z
<p>Masilver: /* Week 3 (Olshausen/Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov16_2011_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec1_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec6_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec8_2010_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6066
VS212B
2011-11-04T02:41:37Z
<p>Masilver: /* Reading and other resources */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2009, 4th edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov29_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec1_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec6_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec8_2010_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=6065
VS212B
2011-11-04T00:11:51Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Oct. 31 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 2 - Phototransduction; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 7 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 9 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen/Silver) ====<br />
* '''Nov. 14 - Redundancy reduction; LGN; visual cortex'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides]<br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
* '''Nov. 16 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov29_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 21 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec1_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Nov. 28 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec6_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Nov. 30 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec8_2010_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=5605
VS212B
2010-11-24T17:54:34Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 8 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 10 - Photoreceptors; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 15 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 17 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 22 - Redundancy reduction; LGN; visual cortex'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides] --><br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 29 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov29_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 1 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec1_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 6 (4-6PM, 394 Minor Hall) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec6_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Dec. 8 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec8_2010_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
<br />
==== Week 6 (Silver) ====</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=5604
VS212B
2010-11-24T17:53:02Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 8 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 10 - Photoreceptors; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 15 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 17 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 22 - Redundancy reduction; LGN; visual cortex'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides] --><br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 29 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov29_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 1 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec1_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 6 (4-6PM, 394 Minor Hall) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec2_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Dec. 8 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec7_2009_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
<br />
==== Week 6 (Silver) ====</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=5603
VS212B
2010-11-24T02:42:31Z
<p>Masilver: /* Week 4 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 8 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 10 - Photoreceptors; lateral inhibition'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides]<br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 15 - Retinal information processing; scale-invariant sampling lattice'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] <br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
* '''Nov. 17 - Sampling; receptive fields; optic nerve'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides]<br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 22 - Redundancy reduction; LGN; visual cortex'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides] --><br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 29 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov29_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 1 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec1_2010_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/fade.avi Grenoble street scene (you may have trouble viewing this on a Mac)]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 6 (4-6PM, 394 Minor Hall) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec2_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Dec. 8 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec7_2009_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
<br />
==== Week 6 (Silver) ====</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=5561
VS212B
2010-11-09T05:44:19Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 2 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 4 - Photoreceptors; lateral inhibition'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides] --><br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 9 - Retinal information processing; scale-invariant sampling lattice'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] --><br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 16 - Sampling; receptive fields; optic nerve'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides] --><br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 18 - Redundancy reduction; LGN; visual cortex'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides] --><br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 29 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov23_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 1 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/fade.avi Grenoble street scene (you may have trouble viewing this on a Mac)]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 6 (4-6PM, 394 Minor Hall) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec2_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Dec. 8 (4-6PM) - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec7_2009_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
<br />
==== Week 6 (Silver) ====</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=5560
VS212B
2010-11-09T05:43:34Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 2 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 4 - Photoreceptors; lateral inhibition'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides] --><br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 9 - Retinal information processing; scale-invariant sampling lattice'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] --><br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 16 - Sampling; receptive fields; optic nerve'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides] --><br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 18 - Redundancy reduction; LGN; visual cortex'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides] --><br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 29 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov23_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 1 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/fade.avi Grenoble street scene (you may have trouble viewing this on a Mac)]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 6 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec2_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
* '''Dec. 7 - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec7_2009_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]<br />
<br />
==== Week 6 (Silver) ====</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=5559
VS212B
2010-11-09T05:43:21Z
<p>Masilver: /* Week 6 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 2 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 4 - Photoreceptors; lateral inhibition'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides] --><br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 9 - Retinal information processing; scale-invariant sampling lattice'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] --><br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 16 - Sampling; receptive fields; optic nerve'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides] --><br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 18 - Redundancy reduction; LGN; visual cortex'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides] --><br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 29 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov23_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 1 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/fade.avi Grenoble street scene (you may have trouble viewing this on a Mac)]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 6 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec2_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 6 (Silver) ====</div>
Masilver
https://rctn.org/w/index.php?title=VS212B&diff=5558
VS212B
2010-11-09T05:43:08Z
<p>Masilver: /* Week 5 (Silver) */</p>
<hr />
<div>=== Reading and other resources ===<br />
* [http://www.amazon.com/First-Steps-Seeing-Robert-Rodieck/dp/0878937579 Rodieck, "First steps in seeing"]<br />
* [http://www.amazon.com/Foundations-Vision-Brian-Wandell/dp/0878938532/ref=sr_1_1?ie=UTF8&s=books&qid=1258702769&sr=8-1 Wandell, "Foundations of Vision"]<br />
* [http://webvision.med.utah.edu/ WEBVISION] (online resource)<br />
* Books on reserve in Optometry library:<br />
** Leo Chalupa and John Werner (2004) The Visual Neurosciences (two volumes)<br />
** Manfred Fahle and Mark Greenlee (2003) The Neuropsychology of Vision<br />
** Manfred Fahle and Tomaso Poggio (2002) Perceptual Learning<br />
** Michael Gazzaniga (2004, 3rd edition) The Cognitive Neurosciences<br />
** Eric Kandel, James Schwartz, and Tom Jessell (2000, 4th edition) Principles of Neural Science<br />
** Jeremy Wolfe, et al. (2009, 2nd edition) Sensation and Perception<br />
<br />
=== Syllabus ===<br />
<br />
==== Week 1 (Olshausen) ====<br />
* '''Nov. 2 - The problem of vision; comparative vision; rods and cones.'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture1.pdf Lecture slides]<br />
** Reading: <br />
*** Land & Fernald paper on [http://redwood.berkeley.edu/bruno/VS212B/land-fernald.pdf Evolution of Eyes], <br />
*** Rodieck: Chapters 3 & 8, plus "Interlude on plotting light intensity" (pp. 151-154)<br />
* '''Nov. 4 - Photoreceptors; lateral inhibition'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture2.pdf Lecture slides] --><br />
<br />
==== Week 2 (Olshausen) ====<br />
* '''Nov. 9 - Retinal information processing; scale-invariant sampling lattice'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture3.pdf Lecture slides] --><br />
** Reading:<br />
*** Van Essen & Anderson article on [http://redwood.berkeley.edu/bruno/VS212B/vanessen-anderson95.pdf Information Processing Strategies and Pathways in the Primate Visual System]<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/degrees-size.pdf Degrees, radians, retinal size and sampling]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/useful-numbers/ Useful numbers in vision science]<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab1/lab1.html Lab 1] - simulation of retinal sampling lattice<br />
<br />
==== Week 3 (Olshausen) ====<br />
* '''Nov. 16 - Sampling; receptive fields; optic nerve'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture4.pdf Lecture slides] --><br />
** Reading:<br />
*** Rodieck: chapters 12-14<br />
*** Handout on [http://redwood.berkeley.edu/bruno/VS212B/aliasing.pdf Aliasing]<br />
*** Simons et al. paper on [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-paper.pdf induced visual fading]<br />
** Demos: <br />
*** [http://redwood.berkeley.edu/bruno/VS212B/mach.gif Mach bands]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/gray-vanish.jpg Vanishing gray]<br />
*** Induced visual fading [http://redwood.berkeley.edu/bruno/VS212B/induced-fading-movie.mov movie]<br />
<br />
* '''Nov. 18 - Redundancy reduction; LGN; visual cortex'''<br />
<!-- ** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-lecture5.pdf Lecture slides] --><br />
** Reading:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/derrington-etal84.pdf Derrington-Krauskopf-Lennie paper] on color-opponency in LGN<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ruderman-color.pdf Ruderman et al paper] on principal components of color in natural images<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/olshausen-field96.pdf Olshausen & Field paper] on sparse coding of natural images<br />
** Demos:<br />
*** [http://www.johnsadowski.com/big_spanish_castle.php Spanish castle color after-effect]<br />
<br />
* [http://redwood.berkeley.edu/bruno/VS212B/lab2/lab2.html Lab 2] - natural image statistics and efficient coding<br />
<br />
==== Week 4 (Silver) ====<br />
* '''Nov. 29 (4-6PM) - Extrastriate cortex: physiology, anatomy, and neuropsychology'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov23_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Chalupa and Werner, Volume 1, Chapter 34, pp. 541-562<br />
*** Fahle and Greenlee, Chapter 7, pp. 210-218<br />
*** Wolfe et al., Chapter 4, pp. 96-101; Chapter 7, pp. 186-187<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/livingstone_and_hubel_1988.pdf Livingstone and Hubel (1988) "Segregation of form, color, movement, and depth: Anatomy, physiology, and perception" Science 240:740-749]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/merigan_and_maunsell_1993.pdf Merigan and Maunsell (1993) "How parallel are the primate visual pathways?" Annual Review of Neuroscience 16:369-402]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/anderson_and_winawer_2005.mov Luminance illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/FALLS.MOV Waterfall motion illusion]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/MT_direction_selectivity.mov Single unit recording in area MT]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1MTmovie.mov Locating area MT with fMRI]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/prosopagnosia.mov Prosopagnosia]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/misbinding.mov Misbinding of color and motion]<br />
* '''Dec. 1 (4-6PM) - Visual attention'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/nov30_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** Fahle and Greenlee, Chapter 7, pp. 218-236<br />
*** Gazzaniga, Chapter 43, pp. 589-606<br />
*** Wolfe et al., Chapter 8, pp. 189-209<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/pessoa_et_al_2003.pdf Pessoa, Kastner, and Ungerleider (2003) "Neuroimaging studies of attention: From modulation of sensory processing to top-down control" Journal of Neuroscience 23:3990-3998]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/reynolds_and_chelazzi_2004.pdf Reynolds and Chelazzi (2004) "Attentional modulation of visual processing" Annual Review of Neuroscience 27:611-647]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Gorilla.mov gorilla change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/quirkology1a.mov The Colour Changing Card Trick]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Airplane.mov airplane change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/Tourists.mov sphinx change blindness demo]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/fade.avi Grenoble street scene (you may have trouble viewing this on a Mac)]<br />
<br />
==== Week 5 (Silver) ====<br />
* '''Dec. 6 (4-6PM) - Experimental methods in visual neuroscience'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec2_2009_lecture_slides.pdf Lecture slides]<br />
** Supplemental readings (optional):<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/logothetis_and_wandell_2004.pdf Logothetis and Wandell (2004) "Interpreting the BOLD signal" Annual Review of Neuroscience 66:735-769]<br />
** Videos from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/calcium_waves_hippocampus.avi single cell calcium imaging]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/tsodyks_et_al.gif evoked versus spontaneous activity with voltage-sensitive dyes]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/spinning_pinwheels.gif orientation pinwheels in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_struct_segmented.mpg gray/white matter segmentation movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/van_essen_spin.mpg cortical inflation and flattening movie]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/V1_upper_right_far_peripheral.avi movie of layout of upper right visual field quadrant]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge.mov rotating wedge stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring.mov expanding ring stimulus used for retinotopic mapping]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wedge_boynton.mpg angle mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/ring_boynton.mpg eccentricity mapping in visual cortex]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/arash_fazl.gif cortical magnification]<br />
<br />
==== Week 6 (Silver) ====<br />
* '''Dec. 7 - Visual cortical development and plasticity'''<br />
** [http://redwood.berkeley.edu/bruno/VS212B/dec7_2009_lecture_slides.pdf Lecture slides]<br />
**Supplemental readings (optional):<br />
*** Fahle and Poggio, Introduction, pp. ix-xix<br />
*** Kandel, Schwartz, and Jessell, Chapter 53, pp. 1049-1051; Chapter 54, pp. 1063-1066; Chapter 56, pp. 1115-1127<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/huberman_et_al_2008.pdf Huberman, Feller, and Chapman (2008) "Mechanisms underlying development of visual maps and receptive fields" Annual Review of Neuroscience 31:479-509]<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/wandell_and_smirnakis_2009.pdf Wandell and Smirnakis (2009) "Plasticity and stability of visual field maps in adult primary visual cortex" Nature Reviews Neuroscience 10:873-884]<br />
** Video from lecture:<br />
*** [http://redwood.berkeley.edu/bruno/VS212B/marla_retinal_waves.MOV Retinal waves]</div>
Masilver