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	<title>VS298: Reading - Revision history</title>
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	<updated>2026-06-14T15:26:23Z</updated>
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	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4338&amp;oldid=prev</id>
		<title>Bruno at 07:21, 11 December 2008</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4338&amp;oldid=prev"/>
		<updated>2008-12-11T07:21:38Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 07:13, 11 December 2008&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l168&quot;&gt;Line 168:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 168:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 4 Dec ====&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 4 Dec ====&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* A.J. Bell, [http://redwood.berkeley.edu/amir/vs298/bell-cross-level.pdf Towards a Cross-Level Theory&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* A.J. Bell, [http://redwood.berkeley.edu/amir/vs298/bell-cross-level.pdf Towards a Cross-Level Theory of Neural Learning].&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;of Neural Learning].&lt;/div&gt;&lt;/td&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-added&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4337&amp;oldid=prev</id>
		<title>Bruno at 07:20, 11 December 2008</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4337&amp;oldid=prev"/>
		<updated>2008-12-11T07:20:25Z</updated>

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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 07:12, 11 December 2008&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l168&quot;&gt;Line 168:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 168:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 4 Dec ====&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 4 Dec ====&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* A.J. Bell [http://redwood.berkeley.edu/amir/vs298/bell-cross-level.pdf Towards a Cross-Level Theory&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* A.J. Bell&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;, &lt;/ins&gt;[http://redwood.berkeley.edu/amir/vs298/bell-cross-level.pdf Towards a Cross-Level Theory&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;of Neural Learning].&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;of Neural Learning].&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4336&amp;oldid=prev</id>
		<title>Bruno at 07:19, 11 December 2008</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4336&amp;oldid=prev"/>
		<updated>2008-12-11T07:19:27Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;==== 2 Sep ====&lt;br /&gt;
&lt;br /&gt;
* Bell, A.J. &amp;#039;&amp;#039;Levels and loops: the future of artificial intelligence and neuroscience&amp;#039;&amp;#039;. Phil Trans: Bio Sci. &amp;#039;&amp;#039;&amp;#039;354&amp;#039;&amp;#039;&amp;#039;:2013--2020 (1999) [http://dx.doi.org/10.1098/rstb.1999.0540 here] or [http://www.cnl.salk.edu/~tony/ptrsl.pdf here]&lt;br /&gt;
* Dreyfus, H.L. and Dreyfus, S.E. [http://redwood.berkeley.edu/amir/vs298/DreyfusDreyfus.pdf &amp;#039;&amp;#039;Making a Mind vs. Modeling the Brain: Artificial Intelligence Back at a Branchpoint&amp;#039;&amp;#039;]. Daedalus, Winter 1988.&lt;br /&gt;
* Mead, C. [http://redwood.berkeley.edu/amir/vs298/Mead.pdf Chapter 1: Introduction] and [http://redwood.berkeley.edu/amir/vs298/Neurons.pdf Chapter 4: Neurons] from &amp;#039;&amp;#039;Analog VLSI and Neural Systems&amp;#039;&amp;#039;, Addison-Wesley, 1989.&lt;br /&gt;
* Jordan, M.I. [http://redwood.berkeley.edu/amir/vs298/PDP.pdf An Introduction to Linear Algebra in Parallel Distributed Processing] in McClelland and Rumelhart, &amp;#039;&amp;#039;Parallel Distributed Processing&amp;#039;&amp;#039;, MIT Press, 1985.&lt;br /&gt;
* Zhang K, Sejnowski TJ (2000)  [http://redwood.berkeley.edu/amir/vs298/zhang-sejnowski.pdf A universal scaling law between gray matter and white matter of cerebral cortex.]  PNAS, 97: 5621–5626.&lt;br /&gt;
&lt;br /&gt;
Optional:&lt;br /&gt;
&lt;br /&gt;
* Land, MF and Fernald, RD. [http://connes.berkeley.edu/~amir/vs298/landfernald92.pdf The Evolution of Eyes], Ann Revs Neuro, 1992.&lt;br /&gt;
&lt;br /&gt;
* Douglas, R and Martin, K. [http://connes.berkeley.edu/~amir/vs298/douglasmartin2007.pdf Recurrent neuronal circuits in the neocortex], Current Biology, 2007.&lt;br /&gt;
&lt;br /&gt;
==== 04 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/linear-neuron/linear-neuron-models.html Linear neuron models]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/lti-conv/lti-convolution.html Linear time-invariant systems and convolution]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/diffeq-sim/diffeq-sim.html Simulating differential equations]&lt;br /&gt;
* Carandini M, Heeger D (1994) [http://redwood.berkeley.edu/amir/vs298/carandini-heeger.pdf Summation and division by neurons in primate visual cortex.]  Science, 264: 1333-1336.&lt;br /&gt;
Optional reading for more background:&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/linear-algebra/linear-algebra.html Linear algebra primer]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/dynamics/dynamics.html Dynamics]&lt;br /&gt;
&lt;br /&gt;
==== 16 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/superlearn1.pdf Handout] on supervised learning in single-stage feedforward networks&lt;br /&gt;
&lt;br /&gt;
==== 18 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/superlearn2.pdf Handout] on supervised learning in multi-layer feedforward networks - &amp;quot;backpropagation&amp;quot;&lt;br /&gt;
* Y. LeCun, L. Bottou, G. Orr, and K. Muller (1998) [http://redwood.berkeley.edu/amir/vs298/lecun-98b.pdf  &amp;quot;Efficient BackProp,&amp;quot;]  in Neural Networks: Tricks of the trade, (G. Orr and Muller K., eds.).&lt;br /&gt;
* [http://www.cnl.salk.edu/ParallelNetsPronounce/index.php NetTalk demo]&lt;br /&gt;
&lt;br /&gt;
==== 23 Sep ====&lt;br /&gt;
* Handout: [http://redwood.berkeley.edu/amir/vs298/hebb-pca.pdf Hebbian learning and PCA]&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 8&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;PDP&amp;#039;&amp;#039;&amp;#039; [http://redwood.berkeley.edu/amir/vs298/chap9.pdf Chapter 9] (full text of Michael Jordan&amp;#039;s tutorial on linear algebra, including section on eigenvectors)&lt;br /&gt;
&lt;br /&gt;
==== 25 Sep ====&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 9&lt;br /&gt;
&lt;br /&gt;
Optional:&lt;br /&gt;
&lt;br /&gt;
* Atick, Redlich. [http://connes.berkeley.edu/~amir/vs298/Atick-Redlich-NC92.pdf What does the retina know about natural scenes?], Neural Computation, 1992.&lt;br /&gt;
&lt;br /&gt;
* Dan, Atick, Reid. [http://www.jneurosci.org/cgi/reprint/16/10/3351.pdf Efficient Coding of Natural Scenes in the Lateral Geniculate Nucleus: Experimental Test of a Computational Theory], J Neuroscience, 1996.&lt;br /&gt;
&lt;br /&gt;
==== 30 Sep ====&lt;br /&gt;
* Foldiak, P. [http://redwood.berkeley.edu/amir/vs298/foldiak90.pdf Forming sparse representations by local anti-Hebbian learning]. Biol. Cybern. 64, 165-170 (1990).&lt;br /&gt;
* Olshausen BA, Field DJ. [http://redwood.berkeley.edu/amir/vs298/bruno-nature.pdf Emergence of simple-cell receptive field properties by learning a sparse code for natural images], Nature, 381: 607-609. (1996)&lt;br /&gt;
&lt;br /&gt;
==== 2 Oct ====&lt;br /&gt;
Optional readings that covers material in lecture in greater depth:&lt;br /&gt;
&lt;br /&gt;
* Rozell, Johnson, Baraniuk, Olshausen. [http://redwood.berkeley.edu/amir/vs298/rozell-sparse-coding-nc08.pdf Sparse Coding via Thresholding and Local Competition in Neural Circuits], Neural Computation 20, 2526–2563 (2008).&lt;br /&gt;
&lt;br /&gt;
* Simoncelli, Olshausen. [http://redwood.berkeley.edu/amir/vs298/simoncelli01-reprint.pdf Natural Image Statistics and Neural Representation], Annu. Rev. Neurosci. 2001. 24:1193–216.&lt;br /&gt;
&lt;br /&gt;
* Smith, Lewicki. [http://redwood.berkeley.edu/amir/vs298/smith-lewicki-nature06.pdf Efficient auditory coding], Nature Vol 439 (2006).&lt;br /&gt;
&lt;br /&gt;
==== 7 Oct ====&lt;br /&gt;
&amp;lt;!--A handout on sparse coding and on &amp;#039;ICA&amp;#039;, something we haven&amp;#039;t yet discussed:&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/sparse-coding-handout.pdf Sparse coding and &amp;#039;ICA&amp;#039; ]--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
Dayan and Abbott has a nice section on sparse coding in Chapter 10. This is on the syllabus for unsupervised learning already, but you may want to focus on section 10.3 and 10.4.&lt;br /&gt;
&lt;br /&gt;
Here is a link to [http://www.dsp.ece.rice.edu/cs/ Compressive Sensive Resources] at Rice. It has an enormous number of recent papers related to compressed sensing and sparse coding.&lt;br /&gt;
&lt;br /&gt;
==== 9 Oct ====&lt;br /&gt;
&lt;br /&gt;
Here are a list of references for David Zipser&amp;#039;s talk: [http://redwood.berkeley.edu/amir/vs298/backpropneuralref.pdf pdf]. David also suggested the following chapter in an upcoming book by Thomas J. Anastasio: [http://redwood.berkeley.edu/amir/vs298/zipserchap10.pdf pdf (waiting for approval to post)]&lt;br /&gt;
&lt;br /&gt;
==== 14 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/miller89.pdf Ocular dominance column development: Analysis and simulation] by Miller, Keller and Stryker.&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/durbin-mitchison.pdf A dimension reduction framework for understanding cortical maps] by R. Durbin and G. Mitchison.&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/horton05.pdf The cortical column: a structure without a function] by Jonathan C. Horton and Daniel L. Adams&lt;br /&gt;
&lt;br /&gt;
Here are some additional links to papers mentioned in lecture. Optional reading:&lt;br /&gt;
&lt;br /&gt;
- Gary Blasdel, [http://redwood.berkeley.edu/amir/vs298/blasdel1992.pdf Differential Imaging of Ocular Dominance and Orientation Selectivity in Monkey Striate Cortex], J Neurosci, 1992.  Another source of many of nice images are in the galleries on Amiram Grinvald&amp;#039;s site: [http://www.weizmann.ac.il/brain/grinvald/]&lt;br /&gt;
&lt;br /&gt;
- From Clay Reid&amp;#039;s lab, [http://www.nature.com/nature/journal/v433/n7026/abs/nature03274.html Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex]. Make sure you look at the supplementary material and videos on their web site (seems partly broken) [http://reid.med.harvard.edu/movies.html].&lt;br /&gt;
&lt;br /&gt;
==== 16 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/tenenbaum-manifold.pdf A Global Geometric Framework for Nonlinear Dimensionality Reduction ], Tenenbaum et al., Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/roweis-saul-manifold.pdf Nonlinear Dimensionality Reduction by Locally Linear Embedding], Roweis and Saul, Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/carlsson-ijcv08.pdf On the Local Behavior of Spaces of Natural Images], Carlsson et al., Int J Comput Vis (2008) 76: 1–12.&lt;br /&gt;
&lt;br /&gt;
Additional reading:&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/webster-face-adaptation.pdf Adaptation to natural facial categories], Michael A. Webster, Daniel Kaping, Yoko Mizokami &amp;amp; Paul Duhamel, Nature, 2004.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/leopold.pdf Prototype-referenced shape encoding revealed by high-level aftereffects], David A. Leopold, Alice J. O’Toole, Thomas Vetter and Volker Blanz, Nature, 2001.&lt;br /&gt;
&lt;br /&gt;
==== 21 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/attractor-networks.pdf Handout] on attractor neural networks&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/hopfield82.pdf original Hopfield (1982) paper]&lt;br /&gt;
* HKP Chapters 2 and 3&lt;br /&gt;
&lt;br /&gt;
==== 23 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/hopfield84.pdf Hopfield (1984) paper]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/zhang96.pdf Kechen Zhang paper on bump circuits]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/olshausen-etal93.pdf Olshausen, Anderson &amp;amp; Van Essen, dynamic routing circuit model]&lt;br /&gt;
&lt;br /&gt;
==== 30 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/probability.pdf A probability primer]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/bayes-prob.pdf Bayesian probability theory and generative models]&lt;br /&gt;
&lt;br /&gt;
==== 4 Nov ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/mog.pdf Mixture of Gaussians model ]&lt;br /&gt;
* HKP Chapter 7, section 7.1&lt;br /&gt;
&lt;br /&gt;
==== 6 Nov ====&lt;br /&gt;
&lt;br /&gt;
Some suggested readings for Jon Shlens&amp;#039; talk. &lt;br /&gt;
&lt;br /&gt;
===== Reviews=====&lt;br /&gt;
* S.H. Nirenberg and J.D. Victor, [http://dx.doi.org/10.1016/j.conb.2007.07.002 Analyzing the activity of large populations of neurons: how tractable is the problem?], Curr Opin Neurobiol 17 (4) (2007), pp. 397--400.&lt;br /&gt;
&lt;br /&gt;
* Shlens J, Rieke F, Chichilnisky E. [http://dx.doi.org/10.1016/j.conb.2008.09.010 Synchronized firing in the retina]. Curr Opin Neurobiol. 2008 Oct 27.&lt;br /&gt;
&lt;br /&gt;
=====Theory=====&lt;br /&gt;
* S. Amari (2001) [http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=930911&amp;amp;isnumber=20133 Information geometry on hierarchy of probability distributions]. IEEE Trans Inform Theory 47:1701-1711&lt;br /&gt;
&lt;br /&gt;
* E. Schneidman, S. Still, M.J. Berry and W. Bialek, [http://prola.aps.org/pdf/PRL/v91/i23/e238701 Network information and connected correlations], Phys Rev Lett 91 (2003) 238701.&lt;br /&gt;
&lt;br /&gt;
=====Experiments=====&lt;br /&gt;
* E. Schneidman, M.J. Berry, R. Segev and W. Bialek,[http://www.nature.com/nature/journal/v440/n7087/full/nature04701.html Weak pairwise correlations imply strongly correlated network states in a neural population], Nature 4400 (7087) (2006), pp. 1007-1012.&lt;br /&gt;
&lt;br /&gt;
* J. Shlens, G.D. Field, J.L. Gauthier, M.I. Grivich, D. Petrusca, A. Sher, A.M. Litke and E.J. Chichilnisky, [http://www.jneurosci.org/cgi/content/abstract/26/32/8254 The structure of multi-neuron firing patterns in primate retina], J Neurosci 260 (32) (2006), pp. 8254-8266.&lt;br /&gt;
&lt;br /&gt;
* Tang A, Jackson D, Hobbs J, Chen W, Smith JL, Patel H, Prieto A, Petrusca D, Grivich MI, Sher A, Hottowy P, Dabrowski W, Litke AM, Beggs JM. [http://www.jneurosci.org/cgi/content/abstract/28/2/505 A maximum entropy model applied to spatial and temporal correlations from cortical networks in vitro]. J Neurosci. 2008 Jan 9;28(2):505-18.&lt;br /&gt;
&lt;br /&gt;
==== 18 Nov ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/info-theory.pdf Information theory primer] &lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/handout-sparse-08.pdf Sparse coding and ICA handout]&lt;br /&gt;
* Bell and Sejnowski, [http://redwood.berkeley.edu/amir/vs298/tony-ica.pdf An Information-Maximization Approach to Blind Separation and Blind Deconvolution], Neural Comp, 1995.&lt;br /&gt;
* Hyvarinen, Hoyer, Inki, [http://redwood.berkeley.edu/amir/vs298/TICA.pdf Topographic Independent Component Analysis], Neural Comp, 2001.&lt;br /&gt;
&lt;br /&gt;
==== 20 Nov ====&lt;br /&gt;
&lt;br /&gt;
* Robbie Jacobs&amp;#039; [http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf notes on Kalman filter]&lt;br /&gt;
* Greg Welch&amp;#039;s [http://www.cs.unc.edu/~welch/kalman/kalmanIntro.html  tutorial on Kalman filter]&lt;br /&gt;
* [http://vision.ucla.edu/~doretto/research.html Dynamic texture models]&lt;br /&gt;
* Kevin Murphy&amp;#039;s [https://redwood.berkeley.edu/amir/vs298/murphy-hmm.pdf  HMM tutorial]&lt;br /&gt;
&lt;br /&gt;
==== 25 Nov ====&lt;br /&gt;
&lt;br /&gt;
* Chris Eliasmith, Charlie Anderson, [http://books.google.com/books?id=J6jz9s4kbfIC Neural Engineering:  Computation, Representation, and Dynamics in Neurobiological Systems], MIT Press, 2004.&lt;br /&gt;
&lt;br /&gt;
Chapter 4 will be emailed to the class.&lt;br /&gt;
&lt;br /&gt;
* Softky and Koch, [http://redwood.berkeley.edu/amir/vs298/softky-koch-jn93.pdf The Highly Irregular Firing of Cortical Cells Is Inconsistent with Temporal Integration of Random EPSPs], J Neuroscience, January 1993, 13(1):334-350.&lt;br /&gt;
* Mainen and Sejnowski, [http://redwood.berkeley.edu/amir/vs298/mainen-sejnowski.pdf Reliability of Spike Timing in Neocortical Neurons], Science, Vol 268, 6 June 1995.&lt;br /&gt;
* Shadlen and Newsome, [http://redwood.berkeley.edu/amir/vs298/shadlen-newsome1.pdf Noise, neural codes and cortical organization], Curr Opin in Neur, 1994, 4:569-579.&lt;br /&gt;
* Shadlen and Newsom, [http://redwood.berkeley.edu/amir/vs298/shadlen-newsome1.pdf Is there a signal in the noise?], Current Opin in Neur, 1995, 5:248-250.&lt;br /&gt;
* Softky, [http://redwood.berkeley.edu/amir/vs298/softky-commentary.pdf Simple codes versus efficient codes], Current Opin in Neuro, 1995, 5:239-247.&lt;br /&gt;
* Izhikevich, [http://redwood.berkeley.edu/amir/vs298/izhikevich-nn03.pdf Simple model of spiking neurons], IEEE Trans Neur Networks, 14(6):2003.&lt;br /&gt;
* Izhikevich, [http://redwood.berkeley.edu/amir/vs298/izhikevich-which-nn04.pdf Which Model to Use for Cortical Spiking Neurons?], IEEE Trans Neur Networks, 15(5):2004.&lt;br /&gt;
&lt;br /&gt;
==== 4 Dec ====&lt;br /&gt;
&lt;br /&gt;
* A.J. Bell [http://redwood.berkeley.edu/amir/vs298/bell-cross-level.pdf Towards a Cross-Level Theory&lt;br /&gt;
of Neural Learning].&lt;/div&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4315&amp;oldid=prev</id>
		<title>Bruno: /* 20 Nov */</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4315&amp;oldid=prev"/>
		<updated>2008-11-21T07:45:34Z</updated>

		<summary type="html">&lt;p&gt;&lt;span dir=&quot;auto&quot;&gt;&lt;span class=&quot;autocomment&quot;&gt;20 Nov&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;
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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 07:37, 21 November 2008&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l148&quot;&gt;Line 148:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 148:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 20 Nov ====&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 20 Nov ====&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf &lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;Robbie Jacobs &lt;/del&gt;notes on Kalman filter]&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;Robbie Jacobs&amp;#039; &lt;/ins&gt;[http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf notes on Kalman filter]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;https&lt;/del&gt;://&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;redwood&lt;/del&gt;.&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;berkeley&lt;/del&gt;.edu/&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;amir&lt;/del&gt;/&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;vs298&lt;/del&gt;/&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;murphy-hmm&lt;/del&gt;.&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;pdf Kevin Murphy&amp;#039;s HMM &lt;/del&gt;tutorial]&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;Greg Welch&amp;#039;s &lt;/ins&gt;[&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;http&lt;/ins&gt;://&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;www.cs&lt;/ins&gt;.&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;unc&lt;/ins&gt;.edu/&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;~welch&lt;/ins&gt;/&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;kalman&lt;/ins&gt;/&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;kalmanIntro&lt;/ins&gt;.&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;html  &lt;/ins&gt;tutorial &lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;on Kalman filter&lt;/ins&gt;]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://vision.ucla.edu/~doretto/research.html Dynamic texture models]&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://vision.ucla.edu/~doretto/research.html Dynamic texture models]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;http&lt;/del&gt;://&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;www&lt;/del&gt;.&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;cs.unc&lt;/del&gt;.edu/&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;~welch&lt;/del&gt;/&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;kalman&lt;/del&gt;/&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;kalmanIntro&lt;/del&gt;.&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;html Greg Welch&amp;#039;s &lt;/del&gt;tutorial &lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;on Kalman filter&lt;/del&gt;]&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;Kevin Murphy&amp;#039;s &lt;/ins&gt;[&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;https&lt;/ins&gt;://&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;redwood&lt;/ins&gt;.&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;berkeley&lt;/ins&gt;.edu/&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;amir&lt;/ins&gt;/&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;vs298&lt;/ins&gt;/&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;murphy-hmm&lt;/ins&gt;.&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;pdf  HMM &lt;/ins&gt;tutorial]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4313&amp;oldid=prev</id>
		<title>Bruno: /* 20 Nov */</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4313&amp;oldid=prev"/>
		<updated>2008-11-21T07:36:50Z</updated>

		<summary type="html">&lt;p&gt;&lt;span dir=&quot;auto&quot;&gt;&lt;span class=&quot;autocomment&quot;&gt;20 Nov&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;
&lt;table style=&quot;background-color: #fff; color: #202122;&quot; data-mw=&quot;interface&quot;&gt;
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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 07:28, 21 November 2008&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l150&quot;&gt;Line 150:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 150:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf Robbie Jacobs notes on Kalman filter]&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf Robbie Jacobs notes on Kalman filter]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [https://redwood.berkeley.edu/amir/vs298/murphy-hmm.pdf Kevin Murphy&amp;#039;s HMM tutorial]&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [https://redwood.berkeley.edu/amir/vs298/murphy-hmm.pdf Kevin Murphy&amp;#039;s HMM tutorial]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-deleted&quot;&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;* [http://vision.ucla.edu/~doretto/research.html Dynamic texture models]&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-deleted&quot;&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;* [http://www.cs.unc.edu/~welch/kalman/kalmanIntro.html Greg Welch&#039;s tutorial on Kalman filter]&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4312&amp;oldid=prev</id>
		<title>Bruno at 07:21, 21 November 2008</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4312&amp;oldid=prev"/>
		<updated>2008-11-21T07:21:28Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;==== 2 Sep ====&lt;br /&gt;
&lt;br /&gt;
* Bell, A.J. &amp;#039;&amp;#039;Levels and loops: the future of artificial intelligence and neuroscience&amp;#039;&amp;#039;. Phil Trans: Bio Sci. &amp;#039;&amp;#039;&amp;#039;354&amp;#039;&amp;#039;&amp;#039;:2013--2020 (1999) [http://dx.doi.org/10.1098/rstb.1999.0540 here] or [http://www.cnl.salk.edu/~tony/ptrsl.pdf here]&lt;br /&gt;
* Dreyfus, H.L. and Dreyfus, S.E. [http://redwood.berkeley.edu/amir/vs298/DreyfusDreyfus.pdf &amp;#039;&amp;#039;Making a Mind vs. Modeling the Brain: Artificial Intelligence Back at a Branchpoint&amp;#039;&amp;#039;]. Daedalus, Winter 1988.&lt;br /&gt;
* Mead, C. [http://redwood.berkeley.edu/amir/vs298/Mead.pdf Chapter 1: Introduction] and [http://redwood.berkeley.edu/amir/vs298/Neurons.pdf Chapter 4: Neurons] from &amp;#039;&amp;#039;Analog VLSI and Neural Systems&amp;#039;&amp;#039;, Addison-Wesley, 1989.&lt;br /&gt;
* Jordan, M.I. [http://redwood.berkeley.edu/amir/vs298/PDP.pdf An Introduction to Linear Algebra in Parallel Distributed Processing] in McClelland and Rumelhart, &amp;#039;&amp;#039;Parallel Distributed Processing&amp;#039;&amp;#039;, MIT Press, 1985.&lt;br /&gt;
* Zhang K, Sejnowski TJ (2000)  [http://redwood.berkeley.edu/amir/vs298/zhang-sejnowski.pdf A universal scaling law between gray matter and white matter of cerebral cortex.]  PNAS, 97: 5621–5626.&lt;br /&gt;
&lt;br /&gt;
Optional:&lt;br /&gt;
&lt;br /&gt;
* Land, MF and Fernald, RD. [http://connes.berkeley.edu/~amir/vs298/landfernald92.pdf The Evolution of Eyes], Ann Revs Neuro, 1992.&lt;br /&gt;
&lt;br /&gt;
* Douglas, R and Martin, K. [http://connes.berkeley.edu/~amir/vs298/douglasmartin2007.pdf Recurrent neuronal circuits in the neocortex], Current Biology, 2007.&lt;br /&gt;
&lt;br /&gt;
==== 04 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/linear-neuron/linear-neuron-models.html Linear neuron models]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/lti-conv/lti-convolution.html Linear time-invariant systems and convolution]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/diffeq-sim/diffeq-sim.html Simulating differential equations]&lt;br /&gt;
* Carandini M, Heeger D (1994) [http://redwood.berkeley.edu/amir/vs298/carandini-heeger.pdf Summation and division by neurons in primate visual cortex.]  Science, 264: 1333-1336.&lt;br /&gt;
Optional reading for more background:&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/linear-algebra/linear-algebra.html Linear algebra primer]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/dynamics/dynamics.html Dynamics]&lt;br /&gt;
&lt;br /&gt;
==== 16 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/superlearn1.pdf Handout] on supervised learning in single-stage feedforward networks&lt;br /&gt;
&lt;br /&gt;
==== 18 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/superlearn2.pdf Handout] on supervised learning in multi-layer feedforward networks - &amp;quot;backpropagation&amp;quot;&lt;br /&gt;
* Y. LeCun, L. Bottou, G. Orr, and K. Muller (1998) [http://redwood.berkeley.edu/amir/vs298/lecun-98b.pdf  &amp;quot;Efficient BackProp,&amp;quot;]  in Neural Networks: Tricks of the trade, (G. Orr and Muller K., eds.).&lt;br /&gt;
* [http://www.cnl.salk.edu/ParallelNetsPronounce/index.php NetTalk demo]&lt;br /&gt;
&lt;br /&gt;
==== 23 Sep ====&lt;br /&gt;
* Handout: [http://redwood.berkeley.edu/amir/vs298/hebb-pca.pdf Hebbian learning and PCA]&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 8&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;PDP&amp;#039;&amp;#039;&amp;#039; [http://redwood.berkeley.edu/amir/vs298/chap9.pdf Chapter 9] (full text of Michael Jordan&amp;#039;s tutorial on linear algebra, including section on eigenvectors)&lt;br /&gt;
&lt;br /&gt;
==== 25 Sep ====&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 9&lt;br /&gt;
&lt;br /&gt;
Optional:&lt;br /&gt;
&lt;br /&gt;
* Atick, Redlich. [http://connes.berkeley.edu/~amir/vs298/Atick-Redlich-NC92.pdf What does the retina know about natural scenes?], Neural Computation, 1992.&lt;br /&gt;
&lt;br /&gt;
* Dan, Atick, Reid. [http://www.jneurosci.org/cgi/reprint/16/10/3351.pdf Efficient Coding of Natural Scenes in the Lateral Geniculate Nucleus: Experimental Test of a Computational Theory], J Neuroscience, 1996.&lt;br /&gt;
&lt;br /&gt;
==== 30 Sep ====&lt;br /&gt;
* Foldiak, P. [http://redwood.berkeley.edu/amir/vs298/foldiak90.pdf Forming sparse representations by local anti-Hebbian learning]. Biol. Cybern. 64, 165-170 (1990).&lt;br /&gt;
* Olshausen BA, Field DJ. [http://redwood.berkeley.edu/amir/vs298/bruno-nature.pdf Emergence of simple-cell receptive field properties by learning a sparse code for natural images], Nature, 381: 607-609. (1996)&lt;br /&gt;
&lt;br /&gt;
==== 2 Oct ====&lt;br /&gt;
Optional readings that covers material in lecture in greater depth:&lt;br /&gt;
&lt;br /&gt;
* Rozell, Johnson, Baraniuk, Olshausen. [http://redwood.berkeley.edu/amir/vs298/rozell-sparse-coding-nc08.pdf Sparse Coding via Thresholding and Local Competition in Neural Circuits], Neural Computation 20, 2526–2563 (2008).&lt;br /&gt;
&lt;br /&gt;
* Simoncelli, Olshausen. [http://redwood.berkeley.edu/amir/vs298/simoncelli01-reprint.pdf Natural Image Statistics and Neural Representation], Annu. Rev. Neurosci. 2001. 24:1193–216.&lt;br /&gt;
&lt;br /&gt;
* Smith, Lewicki. [http://redwood.berkeley.edu/amir/vs298/smith-lewicki-nature06.pdf Efficient auditory coding], Nature Vol 439 (2006).&lt;br /&gt;
&lt;br /&gt;
==== 7 Oct ====&lt;br /&gt;
&amp;lt;!--A handout on sparse coding and on &amp;#039;ICA&amp;#039;, something we haven&amp;#039;t yet discussed:&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/sparse-coding-handout.pdf Sparse coding and &amp;#039;ICA&amp;#039; ]--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
Dayan and Abbott has a nice section on sparse coding in Chapter 10. This is on the syllabus for unsupervised learning already, but you may want to focus on section 10.3 and 10.4.&lt;br /&gt;
&lt;br /&gt;
Here is a link to [http://www.dsp.ece.rice.edu/cs/ Compressive Sensive Resources] at Rice. It has an enormous number of recent papers related to compressed sensing and sparse coding.&lt;br /&gt;
&lt;br /&gt;
==== 9 Oct ====&lt;br /&gt;
&lt;br /&gt;
Here are a list of references for David Zipser&amp;#039;s talk: [http://redwood.berkeley.edu/amir/vs298/backpropneuralref.pdf pdf]. David also suggested the following chapter in an upcoming book by Thomas J. Anastasio: [http://redwood.berkeley.edu/amir/vs298/zipserchap10.pdf pdf (waiting for approval to post)]&lt;br /&gt;
&lt;br /&gt;
==== 14 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/miller89.pdf Ocular dominance column development: Analysis and simulation] by Miller, Keller and Stryker.&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/durbin-mitchison.pdf A dimension reduction framework for understanding cortical maps] by R. Durbin and G. Mitchison.&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/horton05.pdf The cortical column: a structure without a function] by Jonathan C. Horton and Daniel L. Adams&lt;br /&gt;
&lt;br /&gt;
Here are some additional links to papers mentioned in lecture. Optional reading:&lt;br /&gt;
&lt;br /&gt;
- Gary Blasdel, [http://redwood.berkeley.edu/amir/vs298/blasdel1992.pdf Differential Imaging of Ocular Dominance and Orientation Selectivity in Monkey Striate Cortex], J Neurosci, 1992.  Another source of many of nice images are in the galleries on Amiram Grinvald&amp;#039;s site: [http://www.weizmann.ac.il/brain/grinvald/]&lt;br /&gt;
&lt;br /&gt;
- From Clay Reid&amp;#039;s lab, [http://www.nature.com/nature/journal/v433/n7026/abs/nature03274.html Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex]. Make sure you look at the supplementary material and videos on their web site (seems partly broken) [http://reid.med.harvard.edu/movies.html].&lt;br /&gt;
&lt;br /&gt;
==== 16 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/tenenbaum-manifold.pdf A Global Geometric Framework for Nonlinear Dimensionality Reduction ], Tenenbaum et al., Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/roweis-saul-manifold.pdf Nonlinear Dimensionality Reduction by Locally Linear Embedding], Roweis and Saul, Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/carlsson-ijcv08.pdf On the Local Behavior of Spaces of Natural Images], Carlsson et al., Int J Comput Vis (2008) 76: 1–12.&lt;br /&gt;
&lt;br /&gt;
Additional reading:&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/webster-face-adaptation.pdf Adaptation to natural facial categories], Michael A. Webster, Daniel Kaping, Yoko Mizokami &amp;amp; Paul Duhamel, Nature, 2004.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/leopold.pdf Prototype-referenced shape encoding revealed by high-level aftereffects], David A. Leopold, Alice J. O’Toole, Thomas Vetter and Volker Blanz, Nature, 2001.&lt;br /&gt;
&lt;br /&gt;
==== 21 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/attractor-networks.pdf Handout] on attractor neural networks&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/hopfield82.pdf original Hopfield (1982) paper]&lt;br /&gt;
* HKP Chapters 2 and 3&lt;br /&gt;
&lt;br /&gt;
==== 23 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/hopfield84.pdf Hopfield (1984) paper]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/zhang96.pdf Kechen Zhang paper on bump circuits]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/olshausen-etal93.pdf Olshausen, Anderson &amp;amp; Van Essen, dynamic routing circuit model]&lt;br /&gt;
&lt;br /&gt;
==== 30 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/probability.pdf A probability primer]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/bayes-prob.pdf Bayesian probability theory and generative models]&lt;br /&gt;
&lt;br /&gt;
==== 4 Nov ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/mog.pdf Mixture of Gaussians model ]&lt;br /&gt;
* HKP Chapter 7, section 7.1&lt;br /&gt;
&lt;br /&gt;
==== 6 Nov ====&lt;br /&gt;
&lt;br /&gt;
Some suggested readings for Jon Shlens&amp;#039; talk. &lt;br /&gt;
&lt;br /&gt;
===== Reviews=====&lt;br /&gt;
* S.H. Nirenberg and J.D. Victor, [http://dx.doi.org/10.1016/j.conb.2007.07.002 Analyzing the activity of large populations of neurons: how tractable is the problem?], Curr Opin Neurobiol 17 (4) (2007), pp. 397--400.&lt;br /&gt;
&lt;br /&gt;
* Shlens J, Rieke F, Chichilnisky E. [http://dx.doi.org/10.1016/j.conb.2008.09.010 Synchronized firing in the retina]. Curr Opin Neurobiol. 2008 Oct 27.&lt;br /&gt;
&lt;br /&gt;
=====Theory=====&lt;br /&gt;
* S. Amari (2001) [http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=930911&amp;amp;isnumber=20133 Information geometry on hierarchy of probability distributions]. IEEE Trans Inform Theory 47:1701-1711&lt;br /&gt;
&lt;br /&gt;
* E. Schneidman, S. Still, M.J. Berry and W. Bialek, [http://prola.aps.org/pdf/PRL/v91/i23/e238701 Network information and connected correlations], Phys Rev Lett 91 (2003) 238701.&lt;br /&gt;
&lt;br /&gt;
=====Experiments=====&lt;br /&gt;
* E. Schneidman, M.J. Berry, R. Segev and W. Bialek,[http://www.nature.com/nature/journal/v440/n7087/full/nature04701.html Weak pairwise correlations imply strongly correlated network states in a neural population], Nature 4400 (7087) (2006), pp. 1007-1012.&lt;br /&gt;
&lt;br /&gt;
* J. Shlens, G.D. Field, J.L. Gauthier, M.I. Grivich, D. Petrusca, A. Sher, A.M. Litke and E.J. Chichilnisky, [http://www.jneurosci.org/cgi/content/abstract/26/32/8254 The structure of multi-neuron firing patterns in primate retina], J Neurosci 260 (32) (2006), pp. 8254-8266.&lt;br /&gt;
&lt;br /&gt;
* Tang A, Jackson D, Hobbs J, Chen W, Smith JL, Patel H, Prieto A, Petrusca D, Grivich MI, Sher A, Hottowy P, Dabrowski W, Litke AM, Beggs JM. [http://www.jneurosci.org/cgi/content/abstract/28/2/505 A maximum entropy model applied to spatial and temporal correlations from cortical networks in vitro]. J Neurosci. 2008 Jan 9;28(2):505-18.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
==== 18 Nov ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/info-theory.pdf Information theory primer] &lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/handout-sparse-08.pdf Sparse coding and ICA handout]&lt;br /&gt;
* Bell and Sejnowski, [http://redwood.berkeley.edu/amir/vs298/tony-ica.pdf An Information-Maximization Approach to Blind Separation and Blind Deconvolution], Neural Comp, 1995.&lt;br /&gt;
* Hyvarinen, Hoyer, Inki, [http://redwood.berkeley.edu/amir/vs298/TICA.pdf Topographic Independent Component Analysis], Neural Comp, 2001.&lt;br /&gt;
&lt;br /&gt;
==== 20 Nov ====&lt;br /&gt;
&lt;br /&gt;
* [http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf Robbie Jacobs notes on Kalman filter]&lt;br /&gt;
* [https://redwood.berkeley.edu/amir/vs298/murphy-hmm.pdf Kevin Murphy&amp;#039;s HMM tutorial]&lt;/div&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4230&amp;oldid=prev</id>
		<title>Bruno at 06:38, 4 November 2008</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4230&amp;oldid=prev"/>
		<updated>2008-11-04T06:38:16Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;For each lecture, we also have a list of optional reading corresponding to ideas discussed in lecture. You may read these if you are interested in the particular topic: [http://redwood.berkeley.edu/wiki/VS298:_Optional_Reading Optional Reading]&lt;br /&gt;
&lt;br /&gt;
==== 2 Sep ====&lt;br /&gt;
&lt;br /&gt;
* Bell, A.J. &amp;#039;&amp;#039;Levels and loops: the future of artificial intelligence and neuroscience&amp;#039;&amp;#039;. Phil Trans: Bio Sci. &amp;#039;&amp;#039;&amp;#039;354&amp;#039;&amp;#039;&amp;#039;:2013--2020 (1999) [http://dx.doi.org/10.1098/rstb.1999.0540 here] or [http://www.cnl.salk.edu/~tony/ptrsl.pdf here]&lt;br /&gt;
* Dreyfus, H.L. and Dreyfus, S.E. [http://redwood.berkeley.edu/amir/vs298/DreyfusDreyfus.pdf &amp;#039;&amp;#039;Making a Mind vs. Modeling the Brain: Artificial Intelligence Back at a Branchpoint&amp;#039;&amp;#039;]. Daedalus, Winter 1988.&lt;br /&gt;
* Mead, C. [http://redwood.berkeley.edu/amir/vs298/Mead.pdf Chapter 1: Introduction] and [http://redwood.berkeley.edu/amir/vs298/Neurons.pdf Chapter 4: Neurons] from &amp;#039;&amp;#039;Analog VLSI and Neural Systems&amp;#039;&amp;#039;, Addison-Wesley, 1989.&lt;br /&gt;
* Jordan, M.I. [http://redwood.berkeley.edu/amir/vs298/PDP.pdf An Introduction to Linear Algebra in Parallel Distributed Processing] in McClelland and Rumelhart, &amp;#039;&amp;#039;Parallel Distributed Processing&amp;#039;&amp;#039;, MIT Press, 1985.&lt;br /&gt;
* Zhang K, Sejnowski TJ (2000)  [http://redwood.berkeley.edu/amir/vs298/zhang-sejnowski.pdf A universal scaling law between gray matter and white matter of cerebral cortex.]  PNAS, 97: 5621–5626.&lt;br /&gt;
&lt;br /&gt;
==== 04 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/linear-neuron/linear-neuron-models.html Linear neuron models]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/lti-conv/lti-convolution.html Linear time-invariant systems and convolution]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/diffeq-sim/diffeq-sim.html Simulating differential equations]&lt;br /&gt;
* Carandini M, Heeger D (1994) [http://redwood.berkeley.edu/amir/vs298/carandini-heeger.pdf Summation and division by neurons in primate visual cortex.]  Science, 264: 1333-1336.&lt;br /&gt;
Optional reading for more background:&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/linear-algebra/linear-algebra.html Linear algebra primer]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/dynamics/dynamics.html Dynamics]&lt;br /&gt;
&lt;br /&gt;
==== 16 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/superlearn1.pdf Handout] on supervised learning in single-stage feedforward networks&lt;br /&gt;
&lt;br /&gt;
==== 18 Sep ====&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/superlearn2.pdf Handout] on supervised learning in multi-layer feedforward networks - &amp;quot;backpropagation&amp;quot;&lt;br /&gt;
* Y. LeCun, L. Bottou, G. Orr, and K. Muller (1998) [http://redwood.berkeley.edu/amir/vs298/lecun-98b.pdf  &amp;quot;Efficient BackProp,&amp;quot;]  in Neural Networks: Tricks of the trade, (G. Orr and Muller K., eds.).&lt;br /&gt;
* [http://www.cnl.salk.edu/ParallelNetsPronounce/index.php NetTalk demo]&lt;br /&gt;
&lt;br /&gt;
==== 23 Sep ====&lt;br /&gt;
* Handout: [http://redwood.berkeley.edu/amir/vs298/hebb-pca.pdf Hebbian learning and PCA]&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 8&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;PDP&amp;#039;&amp;#039;&amp;#039; [http://redwood.berkeley.edu/amir/vs298/chap9.pdf Chapter 9] (full text of Michael Jordan&amp;#039;s tutorial on linear algebra, including section on eigenvectors)&lt;br /&gt;
&lt;br /&gt;
==== 25 Sep ====&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 9&lt;br /&gt;
&lt;br /&gt;
==== 30 Sep ====&lt;br /&gt;
* Foldiak, P. [http://redwood.berkeley.edu/amir/vs298/foldiak90.pdf Forming sparse representations by local anti-Hebbian learning]. Biol. Cybern. 64, 165-170 (1990).&lt;br /&gt;
* Olshausen BA, Field DJ. [http://redwood.berkeley.edu/amir/vs298/bruno-nature.pdf Emergence of simple-cell receptive field properties by learning a sparse code for natural images], Nature, 381: 607-609. (1996)&lt;br /&gt;
&lt;br /&gt;
==== 2 Oct ====&lt;br /&gt;
Optional readings that covers material in lecture in greater depth:&lt;br /&gt;
&lt;br /&gt;
* Rozell, Johnson, Baraniuk, Olshausen. [http://redwood.berkeley.edu/amir/vs298/rozell-sparse-coding-nc08.pdf Sparse Coding via Thresholding and Local Competition in Neural Circuits], Neural Computation 20, 2526–2563 (2008).&lt;br /&gt;
&lt;br /&gt;
* Simoncelli, Olshausen. [http://redwood.berkeley.edu/amir/vs298/simoncelli01-reprint.pdf Natural Image Statistics and Neural Representation], Annu. Rev. Neurosci. 2001. 24:1193–216.&lt;br /&gt;
&lt;br /&gt;
* Smith, Lewicki. [http://redwood.berkeley.edu/amir/vs298/smith-lewicki-nature06.pdf Efficient auditory coding], Nature Vol 439 (2006).&lt;br /&gt;
&lt;br /&gt;
==== 7 Oct ====&lt;br /&gt;
&lt;br /&gt;
A handout on sparse coding and on &amp;#039;ICA&amp;#039;, something we haven&amp;#039;t yet discussed:&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/sparse-coding-handout.pdf Sparse coding and &amp;#039;ICA&amp;#039; ]&lt;br /&gt;
&lt;br /&gt;
Dayan and Abbott has a nice section on sparse coding in Chapter 10. This is on the syllabus for unsupervised learning already, but you may want to focus on section 10.3 and 10.4.&lt;br /&gt;
&lt;br /&gt;
Here is a link to [http://www.dsp.ece.rice.edu/cs/ Compressive Sensive Resources] at Rice. It has an enormous number of recent papers related to compressed sensing and sparse coding.&lt;br /&gt;
&lt;br /&gt;
==== 9 Oct ====&lt;br /&gt;
&lt;br /&gt;
Here are a list of references for David Zipser&amp;#039;s talk: [http://redwood.berkeley.edu/amir/vs298/backpropneuralref.pdf pdf]. David also suggested the following chapter in an upcoming book by Thomas J. Anastasio: [http://redwood.berkeley.edu/amir/vs298/zipserchap10.pdf pdf (waiting for approval to post)]&lt;br /&gt;
&lt;br /&gt;
==== 14 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/miller89.pdf Ocular dominance column development: Analysis and simulation] by Miller, Keller and Stryker.&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/durbin-mitchison.pdf A dimension reduction framework for understanding cortical maps] by R. Durbin and G. Mitchison.&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/horton05.pdf The cortical column: a structure without a function] by Jonathan C. Horton and Daniel L. Adams&lt;br /&gt;
&lt;br /&gt;
Here are some additional links to papers mentioned in lecture. Optional reading:&lt;br /&gt;
&lt;br /&gt;
- Gary Blasdel, [http://redwood.berkeley.edu/amir/vs298/blasdel1992.pdf Differential Imaging of Ocular Dominance and Orientation Selectivity in Monkey Striate Cortex], J Neurosci, 1992.  Another source of many of nice images are in the galleries on Amiram Grinvald&amp;#039;s site: [http://www.weizmann.ac.il/brain/grinvald/]&lt;br /&gt;
&lt;br /&gt;
- From Clay Reid&amp;#039;s lab, [http://www.nature.com/nature/journal/v433/n7026/abs/nature03274.html Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex]. Make sure you look at the supplementary material and videos on their web site (seems partly broken) [http://reid.med.harvard.edu/movies.html].&lt;br /&gt;
&lt;br /&gt;
==== 16 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/tenenbaum-manifold.pdf A Global Geometric Framework for Nonlinear Dimensionality Reduction ], Tenenbaum et al., Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/roweis-saul-manifold.pdf Nonlinear Dimensionality Reduction by Locally Linear Embedding], Roweis and Saul, Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/carlsson-ijcv08.pdf On the Local Behavior of Spaces of Natural Images], Carlsson et al., Int J Comput Vis (2008) 76: 1–12.&lt;br /&gt;
&lt;br /&gt;
Additional reading:&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/webster-face-adaptation.pdf Adaptation to natural facial categories], Michael A. Webster, Daniel Kaping, Yoko Mizokami &amp;amp; Paul Duhamel, Nature, 2004.&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/leopold.pdf Prototype-referenced shape encoding revealed by high-level aftereffects], David A. Leopold, Alice J. O’Toole, Thomas Vetter and Volker Blanz, Nature, 2001.&lt;br /&gt;
&lt;br /&gt;
==== 21 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/attractor-networks.pdf Handout] on attractor neural networks&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/hopfield82.pdf original Hopfield (1982) paper]&lt;br /&gt;
* HKP Chapters 2 and 3&lt;br /&gt;
&lt;br /&gt;
==== 23 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/hopfield84.pdf Hopfield (1984) paper]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/zhang96.pdf Kechen Zhang paper on bump circuits]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/olshausen-etal93.pdf Olshausen, Anderson &amp;amp; Van Essen, dynamic routing circuit model]&lt;br /&gt;
&lt;br /&gt;
==== 30 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/probability.pdf A probability primer]&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/bayes-prob.pdf Bayesian probability theory and generative models]&lt;br /&gt;
&lt;br /&gt;
==== 4 Nov ====&lt;br /&gt;
&lt;br /&gt;
* [http://redwood.berkeley.edu/amir/vs298/mog.pdf Mixture of Gaussians model ]&lt;/div&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4214&amp;oldid=prev</id>
		<title>Bruno: /* 21 Oct */</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4214&amp;oldid=prev"/>
		<updated>2008-10-23T21:16:31Z</updated>

		<summary type="html">&lt;p&gt;&lt;span dir=&quot;auto&quot;&gt;&lt;span class=&quot;autocomment&quot;&gt;21 Oct&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;
&lt;table style=&quot;background-color: #fff; color: #202122;&quot; data-mw=&quot;interface&quot;&gt;
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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 21:08, 23 October 2008&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l88&quot;&gt;Line 88:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 88:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 21 Oct ====&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 21 Oct ====&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;Handout on &lt;/del&gt;[http://connes.berkeley.edu/~amir/vs298/attractor-networks.pdf &lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;Attractor &lt;/del&gt;neural networks&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;]&lt;/del&gt;&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://connes.berkeley.edu/~amir/vs298/attractor-networks.pdf &lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;Handout] on attractor &lt;/ins&gt;neural networks&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://connes.berkeley.edu/~amir/vs298/hopfield82.pdf original Hopfield (1982) paper]&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* [http://connes.berkeley.edu/~amir/vs298/hopfield82.pdf original Hopfield (1982) paper]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* HKP Chapters 2 and 3&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* HKP Chapters 2 and 3&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4213&amp;oldid=prev</id>
		<title>Bruno: /* 21 Oct */</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4213&amp;oldid=prev"/>
		<updated>2008-10-23T21:11:13Z</updated>

		<summary type="html">&lt;p&gt;&lt;span dir=&quot;auto&quot;&gt;&lt;span class=&quot;autocomment&quot;&gt;21 Oct&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;For each lecture, we also have a list of optional reading corresponding to ideas discussed in lecture. You may read these if you are interested in the particular topic: [http://redwood.berkeley.edu/wiki/VS298:_Optional_Reading Optional Reading]&lt;br /&gt;
&lt;br /&gt;
==== 2 Sep ====&lt;br /&gt;
&lt;br /&gt;
* Bell, A.J. &amp;#039;&amp;#039;Levels and loops: the future of artificial intelligence and neuroscience&amp;#039;&amp;#039;. Phil Trans: Bio Sci. &amp;#039;&amp;#039;&amp;#039;354&amp;#039;&amp;#039;&amp;#039;:2013--2020 (1999) [http://dx.doi.org/10.1098/rstb.1999.0540 here] or [http://www.cnl.salk.edu/~tony/ptrsl.pdf here]&lt;br /&gt;
* Dreyfus, H.L. and Dreyfus, S.E. [http://connes.berkeley.edu/~amir/vs298/DreyfusDreyfus.pdf &amp;#039;&amp;#039;Making a Mind vs. Modeling the Brain: Artificial Intelligence Back at a Branchpoint&amp;#039;&amp;#039;]. Daedalus, Winter 1988.&lt;br /&gt;
* Mead, C. [http://connes.berkeley.edu/~amir/vs298/Mead.pdf Chapter 1: Introduction] and [http://connes.berkeley.edu/~amir/vs298/Neurons.pdf Chapter 4: Neurons] from &amp;#039;&amp;#039;Analog VLSI and Neural Systems&amp;#039;&amp;#039;, Addison-Wesley, 1989.&lt;br /&gt;
* Jordan, M.I. [http://connes.berkeley.edu/~amir/vs298/PDP.pdf An Introduction to Linear Algebra in Parallel Distributed Processing] in McClelland and Rumelhart, &amp;#039;&amp;#039;Parallel Distributed Processing&amp;#039;&amp;#039;, MIT Press, 1985.&lt;br /&gt;
* Zhang K, Sejnowski TJ (2000)  [http://connes.berkeley.edu/~amir/vs298/zhang-sejnowski.pdf A universal scaling law between gray matter and white matter of cerebral cortex.]  PNAS, 97: 5621–5626.&lt;br /&gt;
&lt;br /&gt;
==== 04 Sep ====&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/linear-neuron/linear-neuron-models.html Linear neuron models]&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/lti-conv/lti-convolution.html Linear time-invariant systems and convolution]&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/diffeq-sim/diffeq-sim.html Simulating differential equations]&lt;br /&gt;
* Carandini M, Heeger D (1994) [http://connes.berkeley.edu/~amir/vs298/carandini-heeger.pdf Summation and division by neurons in primate visual cortex.]  Science, 264: 1333-1336.&lt;br /&gt;
Optional reading for more background:&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/linear-algebra/linear-algebra.html Linear algebra primer]&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/dynamics/dynamics.html Dynamics]&lt;br /&gt;
&lt;br /&gt;
==== 16 Sep ====&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/superlearn1.pdf Handout] on supervised learning in single-stage feedforward networks&lt;br /&gt;
&lt;br /&gt;
==== 18 Sep ====&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/superlearn2.pdf Handout] on supervised learning in multi-layer feedforward networks - &amp;quot;backpropagation&amp;quot;&lt;br /&gt;
* Y. LeCun, L. Bottou, G. Orr, and K. Muller (1998) [http://connes.berkeley.edu/~amir/vs298/lecun-98b.pdf  &amp;quot;Efficient BackProp,&amp;quot;]  in Neural Networks: Tricks of the trade, (G. Orr and Muller K., eds.).&lt;br /&gt;
* [http://www.cnl.salk.edu/ParallelNetsPronounce/index.php NetTalk demo]&lt;br /&gt;
&lt;br /&gt;
==== 23 Sep ====&lt;br /&gt;
* Handout: [http://connes.berkeley.edu/~amir/vs298/hebb-pca.pdf Hebbian learning and PCA]&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 8&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;PDP&amp;#039;&amp;#039;&amp;#039; [http://connes.berkeley.edu/~amir/vs298/chap9.pdf Chapter 9] (full text of Michael Jordan&amp;#039;s tutorial on linear algebra, including section on eigenvectors)&lt;br /&gt;
&lt;br /&gt;
==== 25 Sep ====&lt;br /&gt;
* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 9&lt;br /&gt;
&lt;br /&gt;
==== 30 Sep ====&lt;br /&gt;
* Foldiak, P. [http://connes.berkeley.edu/~amir/vs298/foldiak90.pdf Forming sparse representations by local anti-Hebbian learning]. Biol. Cybern. 64, 165-170 (1990).&lt;br /&gt;
* Olshausen BA, Field DJ. [http://connes.berkeley.edu/~amir/vs298/bruno-nature.pdf Emergence of simple-cell receptive field properties by learning a sparse code for natural images], Nature, 381: 607-609. (1996)&lt;br /&gt;
&lt;br /&gt;
==== 2 Oct ====&lt;br /&gt;
Optional readings that covers material in lecture in greater depth:&lt;br /&gt;
&lt;br /&gt;
* Rozell, Johnson, Baraniuk, Olshausen. [http://connes.berkeley.edu/~amir/vs298/rozell-sparse-coding-nc08.pdf Sparse Coding via Thresholding and Local Competition in Neural Circuits], Neural Computation 20, 2526–2563 (2008).&lt;br /&gt;
&lt;br /&gt;
* Simoncelli, Olshausen. [http://connes.berkeley.edu/~amir/vs298/simoncelli01-reprint.pdf Natural Image Statistics and Neural Representation], Annu. Rev. Neurosci. 2001. 24:1193–216.&lt;br /&gt;
&lt;br /&gt;
* Smith, Lewicki. [http://connes.berkeley.edu/~amir/vs298/smith-lewicki-nature06.pdf Efficient auditory coding], Nature Vol 439 (2006).&lt;br /&gt;
&lt;br /&gt;
==== 7 Oct ====&lt;br /&gt;
&lt;br /&gt;
A handout on sparse coding and on &amp;#039;ICA&amp;#039;, something we haven&amp;#039;t yet discussed:&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/sparse-coding-handout.pdf Sparse coding and &amp;#039;ICA&amp;#039; ]&lt;br /&gt;
&lt;br /&gt;
Dayan and Abbott has a nice section on sparse coding in Chapter 10. This is on the syllabus for unsupervised learning already, but you may want to focus on section 10.3 and 10.4.&lt;br /&gt;
&lt;br /&gt;
Here is a link to [http://www.dsp.ece.rice.edu/cs/ Compressive Sensive Resources] at Rice. It has an enormous number of recent papers related to compressed sensing and sparse coding.&lt;br /&gt;
&lt;br /&gt;
==== 9 Oct ====&lt;br /&gt;
&lt;br /&gt;
Here are a list of references for David Zipser&amp;#039;s talk: [http://connes.berkeley.edu/~amir/vs298/backpropneuralref.pdf pdf]. David also suggested the following chapter in an upcoming book by Thomas J. Anastasio: [http://connes.berkeley.edu/~amir/vs298/zipserchap10.pdf pdf (waiting for approval to post)]&lt;br /&gt;
&lt;br /&gt;
==== 14 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/miller89.pdf Ocular dominance column development: Analysis and simulation] by Miller, Keller and Stryker.&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/durbin-mitchison.pdf A dimension reduction framework for understanding cortical maps] by R. Durbin and G. Mitchison.&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/horton05.pdf The cortical column: a structure without a function] by Jonathan C. Horton and Daniel L. Adams&lt;br /&gt;
&lt;br /&gt;
Here are some additional links to papers mentioned in lecture. Optional reading:&lt;br /&gt;
&lt;br /&gt;
- Gary Blasdel, [http://connes.berkeley.edu/~amir/vs298/blasdel1992.pdf Differential Imaging of Ocular Dominance and Orientation Selectivity in Monkey Striate Cortex], J Neurosci, 1992.  Another source of many of nice images are in the galleries on Amiram Grinvald&amp;#039;s site: [http://www.weizmann.ac.il/brain/grinvald/]&lt;br /&gt;
&lt;br /&gt;
- From Clay Reid&amp;#039;s lab, [http://www.nature.com/nature/journal/v433/n7026/abs/nature03274.html Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex]. Make sure you look at the supplementary material and videos on their web site (seems partly broken) [http://reid.med.harvard.edu/movies.html].&lt;br /&gt;
&lt;br /&gt;
==== 16 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/tenenbaum-manifold.pdf A Global Geometric Framework for Nonlinear Dimensionality Reduction ], Tenenbaum et al., Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/roweis-saul-manifold.pdf Nonlinear Dimensionality Reduction by Locally Linear Embedding], Roweis and Saul, Science 2000.&lt;br /&gt;
&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/carlsson-ijcv08.pdf On the Local Behavior of Spaces of Natural Images], Carlsson et al., Int J Comput Vis (2008) 76: 1–12.&lt;br /&gt;
&lt;br /&gt;
Additional reading:&lt;br /&gt;
&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/webster-face-adaptation.pdf Adaptation to natural facial categories], Michael A. Webster, Daniel Kaping, Yoko Mizokami &amp;amp; Paul Duhamel, Nature, 2004.&lt;br /&gt;
&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/leopold.pdf Prototype-referenced shape encoding revealed by high-level aftereffects], David A. Leopold, Alice J. O’Toole, Thomas Vetter and Volker Blanz, Nature, 2001.&lt;br /&gt;
&lt;br /&gt;
==== 21 Oct ====&lt;br /&gt;
&lt;br /&gt;
* Handout on [http://connes.berkeley.edu/~amir/vs298/attractor-networks.pdf Attractor neural networks]&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/hopfield82.pdf original Hopfield (1982) paper]&lt;br /&gt;
* HKP Chapters 2 and 3&lt;br /&gt;
&lt;br /&gt;
==== 23 Oct ====&lt;br /&gt;
&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/hopfield84.pdf Hopfield (1984) paper]&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/zhang96.pdf Kechen Zhang paper on bump circuits]&lt;br /&gt;
* [http://connes.berkeley.edu/~amir/vs298/olshausen-etal93.pdf Olshausen, Anderson &amp;amp; Van Essen, dynamic routing circuit model]&lt;/div&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
	<entry>
		<id>https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4141&amp;oldid=prev</id>
		<title>Bruno at 18:07, 2 October 2008</title>
		<link rel="alternate" type="text/html" href="https://rctn.org/w/index.php?title=VS298:_Reading&amp;diff=4141&amp;oldid=prev"/>
		<updated>2008-10-02T18:07:03Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;table style=&quot;background-color: #fff; color: #202122;&quot; data-mw=&quot;interface&quot;&gt;
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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 17:59, 2 October 2008&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l30&quot;&gt;Line 30:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 30:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 8&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &amp;#039;&amp;#039;&amp;#039;HKP&amp;#039;&amp;#039;&amp;#039; Chapter 8&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &amp;#039;&amp;#039;&amp;#039;PDP&amp;#039;&amp;#039;&amp;#039; [http://connes.berkeley.edu/~amir/vs298/chap9.pdf Chapter 9] (full text of Michael Jordan&amp;#039;s tutorial on linear algebra, including section on eigenvectors)&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* &amp;#039;&amp;#039;&amp;#039;PDP&amp;#039;&amp;#039;&amp;#039; [http://connes.berkeley.edu/~amir/vs298/chap9.pdf Chapter 9] (full text of Michael Jordan&amp;#039;s tutorial on linear algebra, including section on eigenvectors)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-deleted&quot;&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-deleted&quot;&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;==== 25 Sep ====&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-deleted&quot;&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;* &#039;&#039;&#039;HKP&#039;&#039;&#039; Chapter 9&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br/&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 30 Sep ====&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==== 30 Sep ====&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* Foldiak, P. [http://connes.berkeley.edu/~amir/vs298/foldiak90.pdf Forming sparse representations by local anti-Hebbian learning]. Biol. Cybern. 64, 165-170 (1990).&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* Foldiak, P. [http://connes.berkeley.edu/~amir/vs298/foldiak90.pdf Forming sparse representations by local anti-Hebbian learning]. Biol. Cybern. 64, 165-170 (1990).&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;* &#039;&#039;&#039;HKP&#039;&#039;&#039; Chapter 9&lt;/del&gt;&lt;/div&gt;&lt;/td&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-added&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* Olshausen BA, Field DJ Emergence of simple-cell receptive field properties by learning a sparse code for natural images, Nature, 381: 607-609. (1996)&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* Olshausen BA, Field DJ Emergence of simple-cell receptive field properties by learning a sparse code for natural images, Nature, 381: 607-609. (1996)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Bruno</name></author>
	</entry>
</feed>