Cluster

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Connect

get a password

  • press the PASS WORD button on your crypto card
  • enter passoword
  • press enter
  • the 7 digit password is given (without the dash)

ssh to the gateway computer (hadley)

ssh to neuro-calhpc.berkeley.edu (or hadley.berkeley.edu) and use your crypto password

Useful commands

Batch commands

  • start interactive session: qsub -I
  • start interactive session on particular node: qsub -I -l nodes=n0001.cortex

Software modules

  • module list
  • module avail
  • module help

Perceus commands

perceus commands like 'wwnodes' 'wwtop' and 'wwstats' to look at the Cortex cluster compute nodes.

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