Difference between revisions of "VS298: Reading"

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* Tang A, Jackson D, Hobbs J, Chen W, Smith JL, Patel H, Prieto A, Petrusca D, Grivich MI, Sher A, Hottowy P, Dabrowski W, Litke AM, Beggs JM. [http://www.jneurosci.org/cgi/content/abstract/28/2/505 A maximum entropy model applied to spatial and temporal correlations from cortical networks in vitro]. J Neurosci. 2008 Jan 9;28(2):505-18.
 
* Tang A, Jackson D, Hobbs J, Chen W, Smith JL, Patel H, Prieto A, Petrusca D, Grivich MI, Sher A, Hottowy P, Dabrowski W, Litke AM, Beggs JM. [http://www.jneurosci.org/cgi/content/abstract/28/2/505 A maximum entropy model applied to spatial and temporal correlations from cortical networks in vitro]. J Neurosci. 2008 Jan 9;28(2):505-18.
 
  
 
==== 18 Nov ====
 
==== 18 Nov ====
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==== 20 Nov ====
 
==== 20 Nov ====
  
* [http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf Robbie Jacobs notes on Kalman filter]
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* Robbie Jacobs' [http://www.bcs.rochester.edu/people/robbie/jacobslab/cheat_sheet/sensoryIntegration.pdf notes on Kalman filter]
* [https://redwood.berkeley.edu/amir/vs298/murphy-hmm.pdf Kevin Murphy's HMM tutorial]
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* Greg Welch's [http://www.cs.unc.edu/~welch/kalman/kalmanIntro.html  tutorial on Kalman filter]
 
* [http://vision.ucla.edu/~doretto/research.html Dynamic texture models]
 
* [http://vision.ucla.edu/~doretto/research.html Dynamic texture models]
* [http://www.cs.unc.edu/~welch/kalman/kalmanIntro.html Greg Welch's tutorial on Kalman filter]
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* Kevin Murphy's [https://redwood.berkeley.edu/amir/vs298/murphy-hmm.pdf  HMM tutorial]
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==== 25 Nov ====
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* Chris Eliasmith, Charlie Anderson, [http://books.google.com/books?id=J6jz9s4kbfIC Neural Engineering:  Computation, Representation, and Dynamics in Neurobiological Systems], MIT Press, 2004.
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Chapter 4 will be emailed to the class.
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* Softky and Koch, [http://redwood.berkeley.edu/amir/vs298/softky-koch-jn93.pdf The Highly Irregular Firing of Cortical Cells Is Inconsistent with Temporal Integration of Random EPSPs], J Neuroscience, January 1993, 13(1):334-350.
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* Mainen and Sejnowski, [http://redwood.berkeley.edu/amir/vs298/mainen-sejnowski.pdf Reliability of Spike Timing in Neocortical Neurons], Science, Vol 268, 6 June 1995.
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* Shadlen and Newsome, [http://redwood.berkeley.edu/amir/vs298/shadlen-newsome1.pdf Noise, neural codes and cortical organization], Curr Opin in Neur, 1994, 4:569-579.
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* Shadlen and Newsom, [http://redwood.berkeley.edu/amir/vs298/shadlen-newsome1.pdf Is there a signal in the noise?], Current Opin in Neur, 1995, 5:248-250.
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* Softky, [http://redwood.berkeley.edu/amir/vs298/softky-commentary.pdf Simple codes versus efficient codes], Current Opin in Neuro, 1995, 5:239-247.
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* Izhikevich, [http://redwood.berkeley.edu/amir/vs298/izhikevich-nn03.pdf Simple model of spiking neurons], IEEE Trans Neur Networks, 14(6):2003.
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* Izhikevich, [http://redwood.berkeley.edu/amir/vs298/izhikevich-which-nn04.pdf Which Model to Use for Cortical Spiking Neurons?], IEEE Trans Neur Networks, 15(5):2004.
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==== 4 Dec ====
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* A.J. Bell, [http://redwood.berkeley.edu/amir/vs298/bell-cross-level.pdf Towards a Cross-Level Theory of Neural Learning].

Latest revision as of 07:13, 11 December 2008

2 Sep

Optional:

04 Sep

Optional reading for more background:

16 Sep

  • Handout on supervised learning in single-stage feedforward networks

18 Sep

  • Handout on supervised learning in multi-layer feedforward networks - "backpropagation"
  • Y. LeCun, L. Bottou, G. Orr, and K. Muller (1998) "Efficient BackProp," in Neural Networks: Tricks of the trade, (G. Orr and Muller K., eds.).
  • NetTalk demo

23 Sep

25 Sep

  • HKP Chapter 9

Optional:

30 Sep

2 Oct

Optional readings that covers material in lecture in greater depth:

7 Oct

Dayan and Abbott has a nice section on sparse coding in Chapter 10. This is on the syllabus for unsupervised learning already, but you may want to focus on section 10.3 and 10.4.

Here is a link to Compressive Sensive Resources at Rice. It has an enormous number of recent papers related to compressed sensing and sparse coding.

9 Oct

Here are a list of references for David Zipser's talk: pdf. David also suggested the following chapter in an upcoming book by Thomas J. Anastasio: pdf (waiting for approval to post)

14 Oct

Here are some additional links to papers mentioned in lecture. Optional reading:

- Gary Blasdel, Differential Imaging of Ocular Dominance and Orientation Selectivity in Monkey Striate Cortex, J Neurosci, 1992. Another source of many of nice images are in the galleries on Amiram Grinvald's site: [1]

- From Clay Reid's lab, Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex. Make sure you look at the supplementary material and videos on their web site (seems partly broken) [2].

16 Oct

Additional reading:

21 Oct

23 Oct

30 Oct

4 Nov

6 Nov

Some suggested readings for Jon Shlens' talk.

Reviews
Theory
Experiments

18 Nov

20 Nov

25 Nov

Chapter 4 will be emailed to the class.

4 Dec