Publications
Journal Papers
2010
Knoblauch A, Palm G, Sommer FT (2010) Memory capacities for synaptic and structural plasticity. Neural Computation, Volume 22, Issue 2, pp. 289-341 pdf
Koepsell K, Wang X, Hirsch JA, Sommer FT (2010) Exploring the function of neural oscillations in early sensory systems. Focused review in Frontiers in Neuroscience 4 Issue 4 pp. 53-61 Frontiers in Neuroscience
Tsao, D.Y., C. Cadieu, and M. Livingstone. (2010) Object Recognition: Physiological and Computational Insights. In Primate Neuroethology. Edited by M. Platt and A. Ghazanfar. Oxford University Press. 2010 (in press)
2009
Kanerva P (2009) Hyperdimensional Computing: An Introduction to Computing in Distributed Representation with High-Dimensional Random Vectors. Cognitive Computation 1: 139-159 link
Koepsell K, Wang X, Vaingankar V, Wei Y, Wang Q, Rathbun DL, Usrey W, Hirsch J and Sommer FT (2009) Retinal oscillations carry visual information to cortex. Front Syst Neurosci 3:4 pdf
Lauritzen TZ, D’Esposito M, Heeger D and Silver MA. (2009) Top-down flow of visual spatial attention signals from parietal to occipital cortex. Journal of Vision, 9(13):18, 1-14. link
Ming, V. & Holt, L. (2009) Efficient coding in human auditory perception. J. Acoust. Soc. Am. 126.
Monaci G, Vandergheynst P, Sommer FT (2009) Learning bimodal structure in audio-visual data. IEEE Transactions on Neural Networks 20:1898-1910 pdf
Para LC, Beck JM, Bell AJ (2009) On the maximization of information flow between spiking neurons. Neural Computation, in press
2008
Koepsell K, Sommer FT (2008) Information transmission in oscillatory neural activity. Biological Cybernetics 99:403–416 abstract pdf
Rozell CJ, Johnson DH, Baraniuk RG, Olshausen BA (2008) Sparse Coding via Thresholding and Local Competition in Neural Circuits. Neural Computation, 20:2526-2563 pdf
Teeters JL, Harris KD, Millman KJ, Olshausen BA, Sommer FT (2008) Data sharing for computational neuroscience. Neuroinformatics 6:47-55 pdf
2007
Rehn M, Sommer FT (2007) A network that uses few active neurones to code visual input predicts the diverse shapes of cortical receptive fields. J. Comp. Neurosci. 22 (2): 135-146. pdf
Sommer FT (2007) Bunte Theorien für graue Zellen. Gehirn und Geist, Juni 70-76
Wang X, Wei Y, Vaingankar V, Wang Q, Koepsell K, Sommer FT, Hirsch JA (2007) Feedforward excitation and inhibition evoke dual modes of firing in the cat’s visual thalamus during naturalistic viewing. Neuron 55 (2007) 465-478. pdf See also the preview about this paper: P. Reinagel: The inner life of bursts. Neuron 55: 339-341
2006
Bethge M (2006) Factorial coding of natural images: how effective are linear models in removing higher-order dependencies? J. Opt. Soc. Am. A, 23(6): 1253-1268.
Rehn M, Sommer FT (2006) Storing and restoring visual input with collaborative rank coding and associative memory. Neurocomputing 69 (10-12) 1219-1223 pdf
Sommer FT, Kanerva P (2006) Can neural models of cognition benefit from the advantages of connectionism? Behavoral and Brain Sciences 29 (1) 86-87 pdf
2005
George D, Sommer FT (2005) Computing with inter-spike inverval codes in networks of integrate and fire neurons. Neurocomputing 65-66, 414 - 420. pdf
Johnson JS, Olshausen BA (2005) The recognition of partially visible natural objects in the presence and absence of their occluders. Vision Research, 45, 3262-3276. pdf
Johnson JS, Olshausen BA (2005) The earliest EEG signatures of object recognition in a cued-target task are postsensory. Journal of Vision, 5, 299-312. link
Martinez LM, Wang Q, Reid RC, Pillai C, Alonso J-M, Sommer FT, Hirsch JA (2005) Receptive field structure varies with layer in the primary visual cortex. Nature Neuroscience 8 , 372 - 379 pdf
Olshausen BA, Field DJ (2005) How close are we to understanding V1? Neural Computation, 17, 1665-1699. pdf
Sommer FT, Wennekers T (2005) Synfire chains with conductance-based neurons: internal timing and coordination with timed input. Neurocomputing 65-66, 449 - 454. pdf
Refereed Conference Proceedings
2010
M.A. Silver, A.N Landau, T.Z. Lauritzen, W Prinzmetal, L.C. Robertson. Isolating human brain functional connectivity associated with a specific cognitive process. Proceedings of SPIE Volume 7527 – In press.
Culpepper B.J., Olshausen B.A. Learning transport operators for image manifolds. Advances in Neural Information Processing Systems (NIPS), 22. (2010) Y. Bengio, D. Schuurmans, J. Lafferty, C. K. I. Williams and A. Culotta. pdf supplementary materials
2009
Cadieu C.F., Olshausen B.A., (2009) Learning Transformational Invariants from Natural Movies. Advances in Neural Information Processing Systems (NIPS), 21:209-216, 2009. D. Koller and D. Schuurmans and Y. Bengio and L. Bottou, MIT Press, Cambridge, MA. pdf [Movies: Figure 2 wmv / mov , 4a avi / mov , 4b avi / mov , 4c avi / mov , 4d avi / mov ]
Olshausen, B., C. Cadieu, and D.K. Warland. (2009) Learning Real and Complex Overcomplete Representations from the Statistics of Natural Images, Proc. SPIE 7446, 74460S, 2009. link
2008
Garrigues P.J., El Ghaoui L., An Homotopy Algorithm for the Lasso with Online Observations. Advances in Neural Information Processing Systems 21 (NIPS 2008). pdf
Monaci G., Sommer F. T. and Vandergheynst P., Learning Sparse Generative Models of Audiovisual Signals, Proc. of European Conf. on Signal Processing (EUSIPCO08), 2008 pdf
2007
Garrigues P.J. Olshausen B.A. (2007) Learning Horizontal Connections in a Sparse Coding Model of Natural Images. To appear in Advances in Neural Information Processing Systems 20 (NIPS 2007) pdf
Olshausen, B., C. Cadieu, J. Culpepper, and D.K. Warland. (2007) Bilinear Models of Natural Images, Proc. SPIE Int. Soc. Opt. Eng. 6492, 649206, February 2007. pdf
2005
Bell A.J., Parra L.C. (2005) Maximising Sensitivity in a Spiking Network, Advances in Neural Information Processing Systems 17, Saul L.K. and Weiss Y. and Bottou L., MIT Press, Cambridge, MA pdf
Technical Reports
Sohl-Dickstein J, Wang CM, Olshausen BA (2010) An Unsupervised Algorithm For Learning Lie Group Transformations. pdf
Cadieu, C., K. Koepsell (2009) Phase Coupling Estimation from Multivariate Phase Statistics. June 2009. arXiv:0906.3844v1 [nlin.AO]. pdf
W. K. Coulter, C. J. Hillar, F. T. Sommer (2009) Adaptive compressed sensing - a new class of self-organizing coding models for neuroscience. arXiv.org > q-bio > arXiv:0906.1202 pdf
Cadieu, C., K. Koepsell. (2008) A Multivariate Phase Distribution and its Estimation. September 2008. arXiv:0809.4291v2 [q-bio.NC]. pdf
Talks and Posters
2009
Cadieu, C., L. Secundo, E. Chang, B.J. Culpepper, N.M. Barbaro, B.A. Olshausen, R.T. Knight. (2009) Sparse Space-Time Decompositions of ECoG signals. Program No. 894.9/HH7. Chicago, IL: Society for Neuroscience, 2009.
Koepsell K (2009) Phase coupling estimation from multivariate phase statistics. Seminar talk, Smith-Kettlewell Eye Research Institute, San Francisco, California.
Koepsell K (2009) Phase coupling estimation in coupled oscillator systems. Seminar talk, Mathematical Biology Seminar, UC Davis.
Cadieu CF, Koepsell K (2009) A multivariate phase distribution and its estimation. Computational and Systems Neuroscience, Salt Lake City, UT. Frontiers in Systems Neuroscience. Conference Abstract: Computational and systems neuroscience. doi: 10.3389/conf.neuro.06.2009.03.260
Huth A, Cadieu CF, Dale CL, Weber D, Pantazis D, Darvas F, Leahy R, Simpson GV, Koepsell K (2009) Detecting functional connectivity in networks of phase-coupled neural oscillators. Computational and Systems Neuroscience, Salt Lake City, UT. Frontiers in Systems Neuroscience. Conference Abstract: Computational and systems neuroscience. doi: 10.3389/conf.neuro.06.2009.03.258
T.Z. Lauritzen and A. Wade. (2009) Different cortical areas are modulated in different ways by spatial attention in human visual cortex. Optical Society of America, Fall vision meeting. September 24-26, 2009, Seattle, Washington, and Journal of Vision, 9(14):44, 44a. link
T.Z. Lauritzen and A. Wade. (2009) Spatial attention modulates steady state visually-evoked potentials in human visual cortex by a multiplicative gain function. Annual meeting of the Organization for Human Brain Mapping, San Francisco, CA, June 18-23, 2009.
T.Z. Lauritzen and A. Wade. (2009) Spatial attention modulates steady state VEPs in retinotopic human visual cortex. COSYNE Meeting, Salt Lake City and Snowbird, Utah, February 26 - March 3, 2009.
2008
Blanche TJ, Koepsell K, Swindale N, Olshausen BA (2008) Predicting response variability in the primary visual cortex. Computational and Systems Neuroscience, Salt Lake City, UT.
Canolty RT, Soltani M, Koepsell K, Cadieu C, Dalal SS, Edwards E, Nagarajan SS, Kirsch HE, Barbaro NM and Knight RT (2008). Auditory target detection activates frontal and parietal cortices: Evidence from high gamma power and low-frequency phase coherence in the subdural electrocorticogram. Frontiers in Human Neuroscience. Conference Abstract: 10th International Conference on Cognitive Neuroscience. doi: 10.3389/conf.neuro.09.2009.01.119
Cadieu, C., B. Olshausen. (2008) Learning Transformational Invariants from Time-Varying Natural Images. Computational and Systems Neuroscience (Cosyne), Salt Lake City, March 2008. abstract talk
Koepsell K (2008) Spike timing in the context of network dynamics from retina to cortex. Conference talk, Computational and Systems Neuroscience, Salt Lake City, UT.
Koepsell K, Blanche TJ, Swindale N, Olshausen BA (2008) Modeling the influence of local network activity on neuron spiking responses in primary visual cortex. Computational and Systems Neuroscience, Salt Lake City, UT.
T.Z. Lauritzen, M. D’Esposito, D. Heeger and M.A. Silver. (2008) Functional networks underlying human top-down visual spatial attention. Annual Cognitive Neuroscience Society Meeting. April 12-15, 2008, San Francisco, California.
T.Z. Lauritzen, M. D’Esposito, D. Heeger and M.A. Silver. (2008) Human visual attention networks revealed by fMRI coherency analysis. COSYNE Meeting, Salt Lake City and Snowbird, Utah, February 28 - March 4, 2008.
2007
Blanche TJ (2007) The influence of cortical dynamics on spike timing precision in cat V1. Smith-Kettlewell Eye Research Institute, San Francisco, California.
Cadieu, C., B. Olshausen. (2007) Learning Invariant and Variant Components of Time Varying Natural Images Using a Sparse, Multiplicative Model. Computational and Systems Neuroscience (Cosyne) Salt Lake City, March 2007, & Vision Sciences Society, Sarasota May 2007. abstract
Koepsell K (2007) The hidden clock in LGN -- is phase coding employed in early vision?. Göttingen Neurobiology Conference, Göttingen, Germany
Garrigues PJ, Olshausen BA (2007) Learning Horizontal Connections from the Statistics of Natural Images. Computational and Systems Neuroscience, Salt Lake City, Utah.
Blanche TJ (2007) How active is the cortex? COSYNE workshop, The Canyons, Utah.
Blanche TJ, Koepsell K (2007) Spike timing precision and the influence of cortical dynamics. Grand Challenges in Neural Computation, Santa Fe, New Mexico.
T.Z. Lauritzen, M. D’Esposito, D. Heeger and M.A. Silver. (2007) Functional networks underlying top-down visual spatial attention in the human brain. Society for neuroscience annual meeting, 2007, abstract 423.9.
Lauritzen TZ, Shenhav, Silver MA (2007) fMRI coherency analysis reveals feedforward progression of visual responses in human early visual cortex OSA fall vision meeting, Berkeley, CA.
Lauritzen TZ (2007) Functional networks underlying top-down visual spatial attention in the human brain IMM, Danish Technical University, Lyngby, Denmark.
Lauritzen TZ (2007) Neural mechanisms of sustained visual spatial attention ENS, Paris, France.
2006
Blanche TJ, Freiwald WA, Swindale NV (2006) Neural sparseness in cat and monkey visual cortex studied with silicon polytrode arrays. Society for Neuroscience.
Koepsell K, Wang X, Wei Y, Wang Q, Vaingankar V, Hirsch JA, Sommer FT (2006) Retinal oscillations carry visual information to cortex. Computational and Systems Neuroscience, Salt Lake City, Utah.
Koepsell K, Wang X, Wei Y, Wang Q, Vaingankar V, Hirsch JA, Sommer FT (2006) Two channels for visual information to travel from thalamus to cortex. Society for Neuroscience.
Lauritzen TZ (2006) Attention modulation mediated through correlations in the local field potential Annual cognitive neuroscience soc meeting, San Francisco, CA.
2005
Koepsell K, Wang X, Wei Y, Wang Q, Vaingankar V, Hirsch JA, Sommer FT (2005) Ongoing retinal activity explains variability of thalamic responses. Society for Neuroscience.
Lauritzen TZ (2005) Correlations in the local field potential yield non-linear neural response changes Society for Neuroscience, Abstract 274.25.
Lauritzen TZ (2005) Contribution of physiological noise to dendritic non-linearities COSYNE, Salt Lake City, Utah.
Redwood Neuroscience Institute
An incomplete list of publications from the Redwood Neuroscience Institute (2002-2005) is available here (will be updated soon).
