Michael DeWeese
The following is a list of my published papers and some preprints. Many papers are available here as PDFs.
Manuscripts in preparation:
ix. N. Carlson, V.L. Ming, and M.R. DeWeese. Probe stimuli affect receptive field estimation of model auditory neurons. (in preparation)
viii. S. Marzen, J. Zylberberg, and M.R. DeWeese. The effect of natural scene statistics and oculomotor strategy on binocular disparity and ocular dominance maps. (in preparation)
vii. S. Corinaldi and M.R. DeWeese. A network model of task switching optimized to minimize errors predicts several counterintuitive features of human behavioral data. (in preparation).
vi. C. Rodgers, M. Dastjerdi, and M.R. DeWeese. Task-dependent anticipatory activity in both prefrontal cortex and auditory cortex during a purely auditory selective attention task. (in preparation).
Submitted manuscripts:
v. T. Hromádka, A.M. Zador, and M.R. DeWeese. Up-states are rare in awake auditory cortex. (submitted to the Journal of Neurophysiology).
iv. B. Albanna, C. Hillar, J. Sohl-Dickstein, and M.R. DeWeese. Minimum and maximum entropy solutions for binary systems with known means and pairwise correlations. (submitted to Physical Review E).
iii. P. King, J. Zylberberg, and M.R. DeWeese. Inhibitory interneurons decorrelate excitatory cells to drive sparse code formation in a spiking model of V1. (submitted to the Journal of Neuroscience).
ii. J. Zylberberg and M.R. DeWeese. A model of primary visual cortex can exhibit decreasing sparseness while learning a sparse code for natural images. (submitted to Public Library of Science Computational Biology).
i. A.j. Apicella and M.R. DeWeese. Circuit mechanisms that contribute to spatial tuning in primary auditory cortex. (submitted to Journal of Neuroscience).
Publications:
27. J. Zylberberg, D. Pfau, and M.R. DeWeese. Dead leaves and the dirty ground: Low-level image statistics in transmissive and occlusive imaging environments. Physical Review E. (in press; Accepted Dec 4, 2012).
26. P.R. Zulkowski, D.A. Sivak, G.E. Crooks, and M.R. DeWeese. The geometry of thermodynamic control. Physical Review E. 86(4 Pt 1):041148 (2012).
25. N. Carlson, V.L. Ming, and M.R. DeWeese. Sparse codes for speech predict spectrotemporal receptive fields in the inferior colliculus. Public Library of Science Computational Biology. 7(10):e1002250 (2012).
2011-2012 Publication:
24. J. Sohl-Dickstein, P. Battaglino, and M.R. DeWeese. New method for parameter estimation in probabilistic models: Minimum probability flow. Physical Review Letters. 107(22):220601 (2011).
23. J. Sohl-Dickstein, P. Battaglino, and M.R. DeWeese. Minimum Probability Flow Learning. Proceedings of the 28th International Conference on Machine Learning (Bellevue, WA) (2011).
22. J. Zylberberg, J.T. Murphy, and M.R. DeWeese. A sparse coding model with synaptically local plasticity and spiking neurons can account for the diverse shapes of V1 simple cell receptive fields. Public Library of Science Computational Biology. 7(10):e1002250 (2011).
2010-2011 Publications:
21. J. Zylberberg, and M.R. DeWeese. How should prey animals respond to uncertain threats? Frontiers in Computational Neuroscience 5:20. doi: 10.3389/fncom.2011.00020 (2011).
2009-2010 Publications:
20. M.A. Olshausen and M.R. DeWeese. Applied mathematics: The statistics of style. Nature 463(7284), 1027-1028 (2010).
2008-2009 Publications:
19. Y. Yang, M.R. DeWeese, G. Otazu, and A.M. Zador. Millisecond-scale differences in neural activity in auditory cortex can drive decisions. Nature Neuroscience 11, 1262-1263 (2008).
2007-2008 Publications:
18. T. Hromadka, M.R. DeWeese, and A.M. Zador. Sparse representation of sounds in the unanesthetized auditory cortex. PLoS Biol. 6, 124-137 (2008).
2006-2007 Publications:
17. M.R. DeWeese. Whole-Cell Recording In Vivo. Chapter 6 in Current Protocols in Neuroscience. John Wiley & Sons, Inc., pp. 6.22.1-15 (2007).
16. M.R. DeWeese and A.M. Zador. Non-Gaussian membrane potential dynamics imply sparse, synchronous activity in auditory cortex. J. Neuroscience 26(47), 12206-12218 (2006).
Pre July 1, 2006 Publications:
15. M.R. DeWeese and A.M. Zador. Neurobiology: Efficiency Measures. Nature 439(7079), 920-921 (2006).
14. M.R. DeWeese, T. Hromádka, and A.M. Zador. Reliability and representational bandwidth in auditory cortex. Neuron 48, 479-588 (2005).
13. M.R. DeWeese and A.M. Zador. Neural gallops across auditory streams. Neuron 48, 5-7 (2005).
12. M.R. DeWeese and A.M. Zador. Shared and private variability in the auditory cortex. J. Neurophysiol. 92, 1840-1855 (2004).
11. M.R. DeWeese and A.M. Zador. Binary coding in auditory cortex. In Advances in Neural Information Processing Systems. MIT Press, Cambridge, MA, Vol. 15, 101 (2003).
10. M.R. DeWeese, M. Wehr, and A.M. Zador. Binary spiking in auditory cortex. J. Neurosci. 23, 7940-7949 (2003).
9. M.R. DeWeese. An optimal preparation for studying optimization. Neuron 26, 546-548 (2000).
8. M.R. DeWeese and M. Meister. How to measure the information gained from one symbol. Network 10, 325-340 (1999).
7. G. Buracas, A.M. Zador, M.R. DeWeese, and T. Albright. Efficient discrimination of temporal patterns by motion-sensitive neurons in primate visual cortex. Neuron 20, 959-969 (1998).
6. M.R. DeWeese and A. Zador. Asymmetric dynamics in optimal variance adaptation. Neural Computation 10, 1179-1202 (1998).
5. M.R. DeWeese. Optimization principles for the neural code. Network 7, 325-331 (1996).
4. M. DeWeese. Optimization principles for the neural code. In Advances in Neural Information Processing Systems. MIT Press, Cambridge, MA, Vol. 8, p. 281 (1996).
3. W. Bialek and M. DeWeese. Random switching and optimal processing in the perception of ambiguous signals. Phys. Rev. Lett. 74, 3077-3080 (1995).
2. M. DeWeese and W. Bialek. Information flow in sensory neurons. Nuovo Cimento A17, 733 (1995).
1. W. Bialek, M. DeWeese, F. Rieke, and D. Warland. Bits and brains: information flow in the nervous system. Physica A 200, 581-593 (1993).
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