VS265: Homework assignments
Students are encouraged to work in groups, but turn in assignments individually, listing the group members they worked with.
Submission instructions: email both a PDF of your solutions as well as your code (.m or .py files) as attachments to:
rctn.org vs265 (vs265 should be out front)
You can hand in a paper copy of your solutions before class, but you still have to email your code to the address above before the assignment is due.
Resources
Matlab
Amir, the past GSI for the course says "There is a guide to Matlab on the web by Kevin Murphy which is really excellent. I think it would be great for the VS265 students: http://code.google.com/p/yagtom/"
Python
Fernando Perez at the Brain Imaging Center has an excellent set of resources on Python for scientific computing. You will likely find the "Starter Kit" particularly useful.
Assignments
Lab #1, due Wednesday, September 5th at beginning of class
Lab #2, due Wednesday, September 19th at beginning of class
for Python: either ...
In [1]: import scipy.io
In [2]: d = scipy.io.loadmat("data.mat")
In [3]: X,O = d['X'],d['O']
or use data.npz
In [1]: import numpy as np
In [2]: d = np.load('data.npz')
In [3]: X,O = d['X'],d['O']
Lab #3, due Wednesday, Sept. 26 at beginning of class
For Python you can use apples-oranges.npz
In [1]: import numpy as np
In [2]: d = np.load('apples-oranges.npz')
In [3]: d.keys()
Out[3]: ['oranges2', 'apples2', 'apples', 'oranges']
Lab #4, due Thursday, October 4 at 9:00
Matlab code are as separate files below.
For Python you can use
- data2d.npz (see previous assignments above for how to read this in)
- faces2.npz
- hebb.py
- eigmovie.py
- Solutions.pdf This is a solution from a previous version of this class that is really well written.
Lab #5, due Monday, Oct 15 at beginning of class
- lab5
- foldiak scripts (zip)
- sparsenet scripts (zip)
- You will also need the following set of whitened natural movie images: IMAGES.mat
- Solutions Scripts Writeup
Lab #6, due Wednesday, Oct 24 at beginning of class
Python code:
Lab #7, due Wednesday, Oct 31 at beginning of class
Python code:
- hopnet.py - python version of the above code as one file (with run, genpat, and corrupt methods)
- patterns.npz
p = np.load('patterns.npz')
face,hi,X = p['face'], p['hi'], p['X']
# if you load patterns.mat, use:
p = scipy.io.loadmat("patterns.mat")
face,hi,X = [p[k].reshape(10,10).T.reshape(100,1) for k in 'face','hi','X']
# line above converts Fortran to C ordering
- Solutions: The outer product rule to calculate V is given by X*X' + face*face' + hi*hi'; *
Lab #8, due Wednesday, Nov. 14 at beginning of class
Lab #9 (optional), due Monday, Nov. 26 at beginning of class
- lab9.pdf
- boltz.m
- get_batch.m
- sample.m
- draw.m
- sigmoid.m
- scribble.mat
- scribble_v6.mat (version 6)
- extract_patches.m
- prob.m
- show_patches.m
Python code:
- boltz.py - python version of the above code with solution.
- Writeup with code
